| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4050 |
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| Symbol | |
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| ID | 3911857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4620409 |
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| End bp | 4621422 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885954 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_487654 |
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| Protein GI | 86751158 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.208624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCA TGATCGGCAA GCGTCTGATG TTCGCGATTC CGAGCCTGAT CGGCGTCGTG
ATCGTCACCT TTCTGCTGAC CCGGGCGCTG CCCGGCGATC CGGCCGCTTA CTTCGCCGGG
CCCGCTGCCA GCAAGGAGGC GATCGAGCAG ATCCGGCAGA AGCTCGGCCT CGACAAGACG
CTGGCCGAGC AATTCGTGCG CTACACCACC GAACTCGCCC AGGGCGATCT CGGCCAGTCG
CTGACCACCG GACAGCCGGT CGCCACCGAG ATCCGCAACC GGCTGCCGGC CTCCGCCGAG
CTCACCTTGC TCGGCCTGAT GCTGGCGATC GTGATCGCGA TCCCGCTCGG CATCATGGCG
GCGACGCGAC CGGGCTCGTG GATCGATCAC ATCTGCCGCG TCACCACCAC GGCCGGCGTC
TCGCTGCCGG TGTTCTTCAC CGGGCTGCTG CTGGTCTATG TGTTTTACTT CAAGCTCGGC
TGGTCGCCGG CGCCGCTCGG CCGGCTCGAC GTGTTCTACT CGGCGCCGCC GAACGTCACC
GGCTTCTATC TGATCGACAG CCTGATCGCG CGCGAATTCG AGACCTTCCG ATCGGCGTTG
AGCCAATTGC TGCTTCCGGC ATTGACGCTG GCGATCTTCT CGCTGGCGCC GATCGCGCGC
ATGACGCGGG CCTCGATGCT GGCGATCCTG TCGTCCGATT TCGTCCGCAC CGCGCGCGCC
TCCGGCCTGT CGCCCGGCAA GGTGACGATG ACCTACGCCT TCCGCAACGC GATGCTGCCG
GTGATCACCA CGCTCAGCAT GGTGTTCTCG TTCCTGCTCG GCGCCAATGT GCTGGTCGAG
AAGGTGTTCG CCTGGCCGGG CATCGGCTCC TACGCGGTCG AGGCGCTGAT CTCGTCGGAC
TTCGCCCCGG TGCAGGGCTT CGTGCTCACC ATGGCGATCA TGTATGTGCT GCTGAACCTG
GTGATCGACA TCCTCTACGG CGTCATCGAT CCGCGCGTGC GGCTGGAAGG ATAG
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| Protein sequence | MLTMIGKRLM FAIPSLIGVV IVTFLLTRAL PGDPAAYFAG PAASKEAIEQ IRQKLGLDKT
LAEQFVRYTT ELAQGDLGQS LTTGQPVATE IRNRLPASAE LTLLGLMLAI VIAIPLGIMA
ATRPGSWIDH ICRVTTTAGV SLPVFFTGLL LVYVFYFKLG WSPAPLGRLD VFYSAPPNVT
GFYLIDSLIA REFETFRSAL SQLLLPALTL AIFSLAPIAR MTRASMLAIL SSDFVRTARA
SGLSPGKVTM TYAFRNAMLP VITTLSMVFS FLLGANVLVE KVFAWPGIGS YAVEALISSD
FAPVQGFVLT MAIMYVLLNL VIDILYGVID PRVRLEG
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