| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4039 |
|---|
| Symbol | |
|---|
| ID | 3911846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4609039 |
|---|
| End bp | 4610691 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637885943 |
|---|
| Product | phosphoglucomutase |
|---|
| Protein accession | YP_487643 |
|---|
| Protein GI | 86751147 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0033] Phosphoglucomutase |
|---|
| TIGRFAM ID | [TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.425514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCGA AGGTAAGCCC GCTGGCGGGC AAGACCGTCG ACCCCAACAA CCTCGTCAAC
GTGCCGCGCC TGGTGACGGC GTATTTCGCC GGCAAGCCTG ATCCGAAAGT CGCATCCGAG
CGCGTCGCGT TCGGCACCTC GGGGCATCGC GGCTCGTCGC TCAACAACGC CTTCAACGAG
GAGCACATTC TGGCTGTGAG CCAGGCGGTT TGCGACCATC GTGCCGGCGC CGGCATCACC
GGGCCCTTGT TCATCGGCAT CGACACCCAT GCGCTGGCCG AGCCGGCGCT GGTCAGTGCG
CTGGAAGTGT TCGCCGCCAA CGGCGTGGAC GTGGTGATCG ACCAGCACGG CGGCTACACG
CCGACGCCGG TGATCTCCCA CGCGATCCTG ACGCATAATC GCGGCCGCGA CAGCGGCCTC
GCCGACGGCG TGGTGGTGAC GCCGTCCCAC AATCCGCCGG AAGACGGCGG CTTCAAGTAC
AATCCGCCGA ACGGCGGCCC GGCCGATACC GACGTGACGT CCGTGATCGA GAAGGCCGCC
AATGCGCTGC TCGAAGGCGG CCTGAAGGGC GTCAAGCGCA TCCCGTACGA CCGCGCCCGC
AAGGCCGACA ACGTGCACCG GCGCGACTAC GTCACGCCCT ATGTCGAGGA TCTCGCCAAC
GTCGTCGACA TGGAGGCGAT CCGCAGCTCC GGCGTCAAGC TCGGCATCGA TCCGCTCGGC
GGTGCGGCGG TGCATTACTG GCATCCGATC ATCGAGCGCT ACAAGATCGA CGCGAAAGTC
GTCAGCGACG CGGTCGATCC GACTTTCCGT TTCATGACGC TGGATTGGGA CGGCAAGGTG
CGGATGGACT GCTCGTCGCC TTATGCGATG GCGCGGCTGA TCGGGATGCG CGACGATTTC
GACGTCGCCT TCGCCAACGA CACCGACGCC GACCGCCACG GCATCGTCAC CCGCTCCAGC
GGACTGATGA ACCCCAATCA CTATCTCGCG GTGGCGATCT CCTATCTGTT CGCCAACCGG
CCAGAATGGG GCGCGGGCGC CGCGATAGGC AAGACCGCGG TGTCGAGCGC GATGATCGAT
CGCGTCGCCG CCAAGATCGG CCGCAAGGTT GTGGAGACCC CTGTCGGCTT CAAATGGTTC
GTCGACGGGC TGATCGGCGG CGGCTTCGGC TTCGCCGGCG AGGAAAGCGC CGGCGCCTCG
TTCCTGCGCC GCGACGGCAG CGTCTGGACC ACCGACAAGG ACGGCGTCAT TCTCGGCCTG
CTCGCGGCGG AGATCACCGC CAGAAGCAAG GCCGATCCCG GCGAGATCTA TCAGCGCTTG
ACATCCGAAC TCGGCGCGCC GTTCTACGCG CGCATCGACG CGCCGGCCTC CGCCGCGCAG
AAGGCGCTGT TCAAGACGCT GACCGCCGAC AAGCTCGGCA TCCGGGAACT CGCCGGCGAG
CCGGTCACCG CGACGCTGAC CAACGCGCCG GGCAACAACC AGCCGATCGG CGGCGTCAAG
GTGACGACCG CCAACGGCTG GTTCGCGGCG CGGCCATCGG GCACCGAGGA CGTCTACAAG
ATCTACGCCG AGAGCTTCGT CAGCGCCGAG CATCTGACGC GCATCCAGCA CGAGGCGCAG
GCGGCGCTGA GCGCGATGTT CGCGGCAGGT TGA
|
|---|
| Protein sequence | MAAKVSPLAG KTVDPNNLVN VPRLVTAYFA GKPDPKVASE RVAFGTSGHR GSSLNNAFNE
EHILAVSQAV CDHRAGAGIT GPLFIGIDTH ALAEPALVSA LEVFAANGVD VVIDQHGGYT
PTPVISHAIL THNRGRDSGL ADGVVVTPSH NPPEDGGFKY NPPNGGPADT DVTSVIEKAA
NALLEGGLKG VKRIPYDRAR KADNVHRRDY VTPYVEDLAN VVDMEAIRSS GVKLGIDPLG
GAAVHYWHPI IERYKIDAKV VSDAVDPTFR FMTLDWDGKV RMDCSSPYAM ARLIGMRDDF
DVAFANDTDA DRHGIVTRSS GLMNPNHYLA VAISYLFANR PEWGAGAAIG KTAVSSAMID
RVAAKIGRKV VETPVGFKWF VDGLIGGGFG FAGEESAGAS FLRRDGSVWT TDKDGVILGL
LAAEITARSK ADPGEIYQRL TSELGAPFYA RIDAPASAAQ KALFKTLTAD KLGIRELAGE
PVTATLTNAP GNNQPIGGVK VTTANGWFAA RPSGTEDVYK IYAESFVSAE HLTRIQHEAQ
AALSAMFAAG
|
|---|
| |