Gene RPB_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4038 
Symbol 
ID3911845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand- 
Start bp4608129 
End bp4608857 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID637885942 
ProductNnrU 
Protein accessionYP_487642 
Protein GI86751146 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0912478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGTCAT GGCCGCGGGC AGGCCGAGGT GACGAATTGA TCGGCTGGAC CGAATTCGTC 
GCGGCGTTCG TCGTGTTCCT GCTCAGCCAC GCCATTCCGG CGCGGCCCGC GGTTCGCGCC 
AAGCTGGTGC AGGCGCTCGG CGAAACCGGC TTCCTGATCG CCTACAGCGC CGAGTCGCTG 
ATCGTGCTGA CCTGGCTGAT CATCGCCACC GGCCGCGCCC CCTTCGTCGA ATTATGGCCG 
TTCGAGCCCT GGCAGATGTG GGCGCCGAAT CTGGCGCTGC CGCTGGCCTG CCAGTTCGCC 
GCCTTCGGCG TCGGCGCCGC CAATCCGCTG TCGTTCGGCG GCGATCCGAA CAAGCGCTTC 
GATCCGGAGC AGCCGGGCAT CGTCGGCCTC GTCCGGCATC CCTTGCTGTG GGCGATCGGG 
CTGTGGGCCG CCGCGCATGT GGTGCCGAAC GGCGATCTCG CCCACGTCCT GCTGTTCGGC 
TTCTTCGCGC TGATCGCCTT GGCCGGCATG GCGATCATCG ATAGCCGCAA GCGGCGACGG 
ATGGGCGCCG ACGCATGGAA CGCGCTCGCC GCGCGCACCT CGTTCTGGCC GTTCGCGGCG 
CTGGTCAGCG GCCGGTTCCG GCCGCGGAGC TGGCGGATCA GCCTCACGCG GCTCGCGATC 
GGCCTCGCCG CCTGGCTCGT GCTGCTGCTG CTTCATCCAC TGGTGATCGG GGTTTCGCCG 
CTACCCTGA
 
Protein sequence
MWSWPRAGRG DELIGWTEFV AAFVVFLLSH AIPARPAVRA KLVQALGETG FLIAYSAESL 
IVLTWLIIAT GRAPFVELWP FEPWQMWAPN LALPLACQFA AFGVGAANPL SFGGDPNKRF 
DPEQPGIVGL VRHPLLWAIG LWAAAHVVPN GDLAHVLLFG FFALIALAGM AIIDSRKRRR 
MGADAWNALA ARTSFWPFAA LVSGRFRPRS WRISLTRLAI GLAAWLVLLL LHPLVIGVSP 
LP