Gene RPB_4030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4030 
Symbol 
ID3911837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4600272 
End bp4600934 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID637885934 
Producthypothetical protein 
Protein accessionYP_487634 
Protein GI86751138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA TTGTCACCCG GTTGTACGAT TCCAGCAGCA AGCTCGCTGC GTTGGAAGCC 
GACCTGAAGA AGAACAACTA CAAATATGCC GTCGTCACCG GCACTCAGGC CGGCAAGTCG
AGCTCGGTGG ACGACATCAT CGCGGCGATG GGCCGGGCTT ACGTGTCGCG CGGCGACGCC
CGGACCTATG CCGACTACGT CAAGAAGGGC GCCGTCGTGG TCGCGGTCCA GGCCGAGTTC
GGCTTCGCCG CCAAGGCGAC GACGATCCTC GACAGCTACG GCCCGAACAA GATCAGCTTG
CAGTCGTCGT CGTCGTCCGC CGTCGAGATG AGCGAAGCGA CGCCGTTCTC CAACATGATC
CATGCCAAGA CGCTGCTCGA CACGTCGGGC AAGTACAAAT CCTATTCCGG CGACTGGCTG
CTCGTCGACA GCGACAAGAC GTTCTCCGGA ACGCCGCTCG TGATCAGCAG CAAGGGCCCA
TACCAGTCGT TTTCCGGAAC GCCGCTGCTG CTCGACAGCA GCGGTCCCTA CAAGTCCTTC
TCGGGGACTC CTCTGTTGCT GGACGACAGC GGTCCGTACA AATCCTATTC GGGCGAGCCG
CTGCTGCTCA ACAATCCGAC CATCTTCTCC TCCTGGCTGG GCCTGCCAGT GCTCTCCAAG
TAA
 
Protein sequence
MTQIVTRLYD SSSKLAALEA DLKKNNYKYA VVTGTQAGKS SSVDDIIAAM GRAYVSRGDA 
RTYADYVKKG AVVVAVQAEF GFAAKATTIL DSYGPNKISL QSSSSSAVEM SEATPFSNMI
HAKTLLDTSG KYKSYSGDWL LVDSDKTFSG TPLVISSKGP YQSFSGTPLL LDSSGPYKSF
SGTPLLLDDS GPYKSYSGEP LLLNNPTIFS SWLGLPVLSK