| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4014 |
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| Symbol | hemE |
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| ID | 3911821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4580766 |
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| End bp | 4581812 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885918 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_487618 |
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| Protein GI | 86751122 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.104329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0629126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACACAGA AACTCGTGAC GAAACCGTTC ATTGAGGTGC TTTCCGGAAA TCGGCAGGCA
TCTCCCCCGA TGTGGATGAT GCGGCAGGCC GGCCGTTACC TGCCGGAATA CCGCGCGACC
CGCGCCGAAG CCGGCAGCTT CCTCGATCTG TGCTTCAACG CCAAGCTCGC CGCCGAGGTG
ACGTTGCAGC CGATCCGGCG CTTCGGCTTC GACGCCGCGA TCATCTTTTC GGATATTCTG
GTCGTGCCTT ACGCGCTCGG ACGCGCGGTG CGCTTCGAGG TCGGCGAAGG CCCGCGGCTC
GATCCGTTGA ATTCGCCGGA CCTGGTCGGC ACGCTGAATG GCGCGATCGA CCTGTCGAAG
CTCGAGCCGG TGTTCGAAGC GCTGCGCATC GTGCGCAGCG AGCTCGCCCC GGAGACGACG
CTGATCGGCT TCTGTGGCGC GCCGTTCACC GTCGCGACCT ACATGGTCGC GGGTCAGGGC
ACGTCGGATC AGCACCCGGC GCGACTGATG GCGTATCAGC ACCCCGGCGC GTTCGCCAGG
ATCATCGACG TGCTGGTCGA GAGTTCGATC CAGTATCTGT TGAAGCAGCT CGAGGCCGGC
GCCGACGTGC TGCAGATCTT CGACACCTGG GGCGGCATCC TGCCGCCCCG CGAATTCGAG
AAGTGGTGCA TCGAGCCGAC CCGCCGCATC GTCGAGGGTG TCCGCAAGGT GAGCCCCGGC
GCCAAGATCA TCGGCTTCCC GCGCGGCGCC GGCGCGATGC TGCCGGACTT CATCGCGCGC
ACCGGCGTCG ACGCCGTGAG CATCGACTGG ACGGCCGAGC CGAACATGAT CCGCGAACGG
GTGCAGAGCA AGGTCGCGGT TCAGGGCAAC CTCGATCCGC TGCTGCTGAT CGCCGGCGGT
TCGGCGCTCG ATCAAGGCGT CGACGACGTG CTGAAGAACT TCTCGGCCGG ACGCCACATC
TTCAATCTCG GCCACGGCAT CACGCCGGAC GCGCCGGTGG CGCATGTCGA GCAGATGGTG
AAACGGGTCC GCGCCTACAA AGGCTGA
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| Protein sequence | MTQKLVTKPF IEVLSGNRQA SPPMWMMRQA GRYLPEYRAT RAEAGSFLDL CFNAKLAAEV
TLQPIRRFGF DAAIIFSDIL VVPYALGRAV RFEVGEGPRL DPLNSPDLVG TLNGAIDLSK
LEPVFEALRI VRSELAPETT LIGFCGAPFT VATYMVAGQG TSDQHPARLM AYQHPGAFAR
IIDVLVESSI QYLLKQLEAG ADVLQIFDTW GGILPPREFE KWCIEPTRRI VEGVRKVSPG
AKIIGFPRGA GAMLPDFIAR TGVDAVSIDW TAEPNMIRER VQSKVAVQGN LDPLLLIAGG
SALDQGVDDV LKNFSAGRHI FNLGHGITPD APVAHVEQMV KRVRAYKG
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