| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4009 |
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| Symbol | |
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| ID | 3911816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4574992 |
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| End bp | 4575903 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885913 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_487613 |
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| Protein GI | 86751117 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.586573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00557292 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCATCG ACACCGACCT CGACCGCACG CCCGCTGTTT CCGATGACCC GGTGGAAGCC
CGACGGACGC AGGCACGCGC CTGGTTCGAG GGCCTGCGCG ATCGGATCTG CGCCGAGATC
GAAACGCTGG AACGCGAGGC GCCGGCCGCA TTGTTTCCCG GCGAGCCCGC GACCTTCAGC
TACAAGCCGT GGCAGCGCAA AACCGGCGCC GGCGGCGGCG TCGGCGGTTT CCTCTCGGGC
GGCCGGCTGT TCGAGAAGAT CGGCATCCAC ACCTCGTCGG CCAACGGCAC GCTGACGCCG
GAGATGGCGA AGAATCTGCC CGGCGACGGC GTCACGCGCG ACTACGTCTC GACCAGCATC
AGCCTGATCA TGCATCCGCG CAGTCCGCGG GTCCCCACCG TGCACATGAA CACCCGGTTC
CTGTCGACGT CGCAGGGCTG GTTCGGCGGC GGCGCCGATC TGACGCCGAT GCTGCCCGAG
CAGCGCAGCC AGGACGCCGA GGACGCGGTG ATGTTCCACG CCGCCATGAA GGCCGCCTGC
GACGCCCACG ATCCGGCTTA CTACGCGAAA TTCAAGCCCT GGGCCGACAC TTACTTCTTC
CTGCCGCATC GCGGCACCGC GCGCGGCGTC GGCGGCATCT TCTACGATCA CCTGAACAGC
GGCGATTTCG AGCGCGACTT TGCCTTCACC CGCGACGTCG GCGCGGCATT GCTCGAGATC
TATCCGAGGA TCGTGCGCAA GCGCATGGTC GAGCCGTGGA CCGAGCAGGA GCGGGCGCAG
CAACTCGCCT GCCGCGGGCT CTATGTCGAG TTCAACCTGT TGTACGACAA GGGCACGATG
TTCGGCCTGC AGACCGGCGG CAACACCGAG ACCATCATGA GCTCGATGCC GCCGCTGGTG
AGCTGGAGCT GA
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| Protein sequence | MTIDTDLDRT PAVSDDPVEA RRTQARAWFE GLRDRICAEI ETLEREAPAA LFPGEPATFS
YKPWQRKTGA GGGVGGFLSG GRLFEKIGIH TSSANGTLTP EMAKNLPGDG VTRDYVSTSI
SLIMHPRSPR VPTVHMNTRF LSTSQGWFGG GADLTPMLPE QRSQDAEDAV MFHAAMKAAC
DAHDPAYYAK FKPWADTYFF LPHRGTARGV GGIFYDHLNS GDFERDFAFT RDVGAALLEI
YPRIVRKRMV EPWTEQERAQ QLACRGLYVE FNLLYDKGTM FGLQTGGNTE TIMSSMPPLV
SWS
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