| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3993 |
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| Symbol | |
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| ID | 3911800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4560114 |
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| End bp | 4561547 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637885897 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_487597 |
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| Protein GI | 86751101 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02040] transcriptional regulator PpsR |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0929591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGTGT TCAAATCTCC GAAGGAGTCG CTGGGGGATC TCGGTGCCCA GTCTGCCGCC
AAGCTGATCG CCGCTGCGAC CGATGTCGCG CTGGTCGTCG ATTCGCAGGG CGTGATCCGG
GACGTGGCGT TCAACAAGGA CGAACTGGCT CTCGAACTGG ACGGCCAGGG CCGTTGGCTC
GAGTCCCGGC TGGTCGACAT CGTGACCTCC GACACTCAGC CGAAAATTCG CGAGCTGTTG
CTCGACGCGA CCGTGCGTGA CGCGCCGACC TGGCGTCAGG TCAACCATCC CTCGCCGGGC
GGCGACGACG TGCCGGTGCT GTACTCGGCC ATCAATTACG GGCCCGACGA TCGCCTGCTG
GTGGTCGGCC GTGATCTGCG TCAACTCGCG ATGATGCAAC AGCGTCTAAT CAACGCCCAG
CAGTCGATGG AGCGAGACTA CATCCGGCTG CGGCACGCCG AAACGCGGTA CCGGCTGCTG
TTTCAGGTCT CGTCGGAAGC CGTCATGATC GTCGACGCGA GCAGCGAATT GATCGTGGAT
GCCAACCCGG CGACGCTGGC GCTGTTCGAC ATGACTGCAG CGCAGACATT GAATTCGGCG
GTCATCGGCC ATTTCGGCAG CGCCGACCAG CAGGTCGTGA TGAAATTGTT CGGCGAGGTC
CGCACCACCG GCCGGGACGG CCGCGCCAAA GTGCGACTCG CCAGCAGCGG CCGCGAGTGC
GAATTGTCGG CGTCCTTGTT CAGGCAAGAG AACGCCTCGC TGTTCCTGGT CCGCCTGACA
TCGCAATCGG CCGTGCCGGA AAGCGGCGCC GCGAAGAATG CGTCGTTGCT GCTGAAGTAC
TTCGAGGCCG GCGCCGACGC GCTGGTCATC ACCCAGTTCG ACGGACGCGT CATTCGGGCC
AATCTCGCCT TTCTGGAAAT GGCGCAACTC GGCAGCGCCG AGCAGGCGCG CGGCCAATTG
CTCGACCGTT GGCTCGGCCG GACCGGCGTC GATCTCAGCG TCGCGCTGGC CAATTTGCGG
CAGAGCGGCG CCATCAAACT GTTCGCAACC GTGCTGCGCG GCGAGTACGG CGCTGCCGCC
GAAGTCGAGG TCTCGGCGGT CGCGCTGAAC GACATCGAGG ACAAGCCGTG CTTCGGCTTC
GCGATCCGCA ACGTCGAGAA GCGGTTGCCC GCGTCGCCGA GTTCGAAGCG GGAACTGCCG
CGCTCGGTGG CCCAACTCAC CGAACTGATC GGCCGGGTGC CGCTGCGCGA CCTCGTGCGC
GAAACCACCG ATGTGATCGA AAAGCTGTCG ATCGAGGCGG CGCTGGAGCT GACCGGCGAC
AACCGGGCGT CGGCGGCCGA CATGCTGGGT CTCAGCCGTC AAAGCCTGTA TGTGAAATTG
CGTCGCTACG GCCTCGCGGA ACACGCGCCG GAGGGAGAGG CTGCAGATGA ATAA
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| Protein sequence | MQVFKSPKES LGDLGAQSAA KLIAAATDVA LVVDSQGVIR DVAFNKDELA LELDGQGRWL
ESRLVDIVTS DTQPKIRELL LDATVRDAPT WRQVNHPSPG GDDVPVLYSA INYGPDDRLL
VVGRDLRQLA MMQQRLINAQ QSMERDYIRL RHAETRYRLL FQVSSEAVMI VDASSELIVD
ANPATLALFD MTAAQTLNSA VIGHFGSADQ QVVMKLFGEV RTTGRDGRAK VRLASSGREC
ELSASLFRQE NASLFLVRLT SQSAVPESGA AKNASLLLKY FEAGADALVI TQFDGRVIRA
NLAFLEMAQL GSAEQARGQL LDRWLGRTGV DLSVALANLR QSGAIKLFAT VLRGEYGAAA
EVEVSAVALN DIEDKPCFGF AIRNVEKRLP ASPSSKRELP RSVAQLTELI GRVPLRDLVR
ETTDVIEKLS IEAALELTGD NRASAADMLG LSRQSLYVKL RRYGLAEHAP EGEAADE
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