| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3987 |
|---|
| Symbol | |
|---|
| ID | 3911794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4555272 |
|---|
| End bp | 4555691 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637885891 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_487591 |
|---|
| Protein GI | 86751095 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3474] Cytochrome c2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.855884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.188367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCCGAA AATTTCTCGC AATTGTCACC ATCACCGCTG CCGCAGGATC TCTGTCGACA
GGTATCGCCT CGGCGCAGGA CGCCGCCAAG GGCGAAGCGG TGTTCAAGCA GTGCATGACC
TGCCATCGTG CCGACAAGAA TATGGTCGGA CCGGCCCTCG GCGGCGCCGT CGGCCGTAAG
GCGGGCACGG CTGCCGGCTT CACCTATTCG CCGCTGAACC ACAATTCCGG CGAAGCCGGT
CTGGTCTGGA CCCAGGAAAA CATCGTGGCC TACCTGCCGG ATCCGAATGC CTTCCTGAAG
AAGTTCCTCA CCGACAAGGG CCAGGCCGAC AAGGCCGTCG GTTCGACCAA GATGACCTTC
AAACTGGCCA ACGAACAGCA GCGCAAGGAT GTTGCGGCGT ATCTCGCCAC GCTGAAGTAA
|
|---|
| Protein sequence | MVRKFLAIVT ITAAAGSLST GIASAQDAAK GEAVFKQCMT CHRADKNMVG PALGGAVGRK
AGTAAGFTYS PLNHNSGEAG LVWTQENIVA YLPDPNAFLK KFLTDKGQAD KAVGSTKMTF
KLANEQQRKD VAAYLATLK
|
|---|
| |