| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3986 |
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| Symbol | |
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| ID | 3911793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4553594 |
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| End bp | 4554955 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637885890 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_487590 |
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| Protein GI | 86751094 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02040] transcriptional regulator PpsR |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.994596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.222002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCAA AACCCGCCCA ACCCGACATC ACCCTCCTTC TGGATATGGA TGGCGTGATC
CGCGACGCTT CCCTTTCACC GGCTCTGGCC GGGGAAAGTG TTCAGGGTTG GCTCGGCCAA
GCCTGGACCG ATGTTGCCGG CGATGATGGT GGCGACAAGG TCCGGCGCAT GGTCGAGGAT
GCCCGGACCA GCGGAATCTC TGCATTTCGG CAGGTAAATC AACGATTTCC GTCCGGCGCC
GAGCTCCCGA TCGAATTCAC CACCATGCTA CTCGGTGATC GCACCGGACT GCTCGCGGTG
GGCAAGAACC TGCAGGCGGT GACCGAACTG CATGCGCGAC TGATTGCGGC GCAACAAACG
ATCGAGCGCG ACTACTGGCG GCTGCGTGAA ATGGAAACGC GTTATCGGCT GGTATTCGAC
GCTGCAACCG AAGCGGTGAT GATCGTCTCG GCGCACGATC TCCGGATCGT CGAGGCCAAT
CGGGCCGCGG TGCAGGCCCT CAGCGGGGTC GACCGTGACA ACGAGGATGT CACCGGCCGC
GAGATCTTGA ACGAGGTTGC GCAGCTCGAC CGCGATGCGG TTCGCGAAAT GCTGGCGCGG
GTCCGTGATC GCGGCAAAGC GCTGAGCATC CTCGTGCATA TCGGCCGCGA TGCGCGGCCA
TGGATGTTGC GTGGCTCGCT GGTGTCGTCG GAACAAGGGC AGGTGTTCCT GCTGCAATTC
TCACCGGTCG CCACGACTTC GCGGGACGAC GAACGCGCCG AGCCGACCGT GCTCAAGACG
CTGATCGACC GGGTGCCGGA CGGCTTCGTC GCGCTCGACG CCGGCGGCGT CATCCGCCAC
GCCAATCAGG CCTTTCTGGA CCTCGTCCAG ATCGGCTCGA AGGGATCCGC GATCGGCGAA
TCGCTCGGTC GTTGGCTCAA TCAGCCCGGT GCAGACCTCG CGGCGCTGAT GTCGCATCTG
CAGCGCTACA AGACCGTGCG GCTGTTTCAG ACCTCCATTC GCGGCGAACT CGGGAGCGAG
ACGGATGTCG AGATCTCGGC GGTCGACGGC GACGACCACA ACTACCTCGG TGTACTGATC
AGGAATGTGT CGCGGCGTCT CGGCGGCGGC GAAAGCGATG CACTACGCTC GGCGCTCGGC
CCGATCAGCA AGCAGCTCGG CCGCTCTTCG CTGAGAAAGC TGGTCAAGAA TACCGTAGGC
ATCGTCGAAC GCCACTATGT CAAGGAAGCG CTGGAACTCA CCAAGGGCAA CCGCACGGCC
ACTGCCGAAC TGCTGGGGTT GAGCCGGCAA AGTCTCTATG CCAAGCTCGC GCGCTATGGG
CTCGACGACA AGGGTGCCGT CTCCCAAAAC GCCGAGGACT GA
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| Protein sequence | MSAKPAQPDI TLLLDMDGVI RDASLSPALA GESVQGWLGQ AWTDVAGDDG GDKVRRMVED
ARTSGISAFR QVNQRFPSGA ELPIEFTTML LGDRTGLLAV GKNLQAVTEL HARLIAAQQT
IERDYWRLRE METRYRLVFD AATEAVMIVS AHDLRIVEAN RAAVQALSGV DRDNEDVTGR
EILNEVAQLD RDAVREMLAR VRDRGKALSI LVHIGRDARP WMLRGSLVSS EQGQVFLLQF
SPVATTSRDD ERAEPTVLKT LIDRVPDGFV ALDAGGVIRH ANQAFLDLVQ IGSKGSAIGE
SLGRWLNQPG ADLAALMSHL QRYKTVRLFQ TSIRGELGSE TDVEISAVDG DDHNYLGVLI
RNVSRRLGGG ESDALRSALG PISKQLGRSS LRKLVKNTVG IVERHYVKEA LELTKGNRTA
TAELLGLSRQ SLYAKLARYG LDDKGAVSQN AED
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