| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3981 |
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| Symbol | |
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| ID | 3911788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4547592 |
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| End bp | 4548878 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885885 |
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| Product | light-independent protochlorophyllide reductase subunit N |
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| Protein accession | YP_487585 |
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| Protein GI | 86751089 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01279] light-independent protochlorophyllide reductase, N subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.120682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC ACGTGCAGCC CTGCGCCGCG CCAGCGGAAG ATCCTGTCTC GCGTGCGGTT
CGCACCGAGA GCGGCCAGCG CGAAGTCTTC TGCGGTCTCA CCGGCATCGT CTGGCTTCAC
CGCAAGATTC AGGACGCGTT CTTCCTGGTC GTCGGCTCGC GTACTTGTGC GCATCTGATC
CAGTCGGCCG CCGGCGTGAT GATCTTCGCC GAACCGCGCT TCGGCACCGC CATCATGGAA
GAGAAGGACC TCGCCGGTCT CACCGACGCC AATGACGAAC TCGATCGCAT CGTCACGCAG
TTGCTGACCC GGCGGCCCGA CATCAAGCTG CTGTTCCTCG TCGGTTCCTG CCCGTCGGAA
GTGATCAAGC TCGATCTGTC GCGCGCGGCG CTGCGGCTGT CGCAGCGGTT CTCGCCCGGC
GTGCGCATCC TGAACTACTC TGGCAGCGGC ATCGAGACCA CCTTCACCCA GGGCGAGGAT
TCCTGCCTCG CGTCGCTGGT GCCGGCATTG CCCGCGGCCC AGGACGAAAC GTCGTCGCTG
CTGGTGATAG GCTCGCTCGC CGACGTCGTC GAGGACCAGT TCATGCGGAT GTTCGATGCG
CTCGGCATCG GCCCCGTGCA GTTCTTTCCG CCGCGCAAAT CGACCGCGCT GCCGAGCGTT
GGCCCGAACA CCAAGATCCT GATGGCGCAG CCGTTCCTGC CGGACACCGT GCGTGCGCTG
CAGGAGCGCG GCGCCAAGCG GCTGGCCGCG CCGTTCCCGC TCGGCGTCGA AGGCACCACC
GGCTGGCTGC GCGCCGCCGC CGATGCATTT GGGATCGACG CTGCGACATT CGACCGGGTG
ACGGAGCCGA ACCGCGTCCG TGCCGAACGC GCGCTCGGCG CCTACAAGGC CGAACTCGGT
GGCCGCCGGA TTTTCTTCTT TCCCGACTCC CAGCTCGAAA TTCCGCTGGC GCGGTTTCTC
GCGCGCGAGC TGTCGATGCA ATTGGTCGAG GTCGGCACGC CGTATCTGCA CCGCGAGCAT
CTCGCGGAGG AGCTGAAGCT GCTGCCCGCC GGCGTCGCGC TGACCGAAGG TCAGGACGTC
GACCTGCAGC TCGACCGCTG CCGGCTTGCA CGTCCCGACA TCGCCGTCTG CGGTCTCGGC
CTCGCCAATC CGCTCGAGGC CGAAGGCATC ACCACGAAGT GGTCGATTGA ACTCGTCTTC
ACCCCGATCC AGGGGTACGA GCAGGCGGCC GACCTCGCTG AATTGTTCGC GCGCCCGCTC
GTCCGTCGCG CCAAGCTGGT GGCCTGA
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| Protein sequence | MTVHVQPCAA PAEDPVSRAV RTESGQREVF CGLTGIVWLH RKIQDAFFLV VGSRTCAHLI
QSAAGVMIFA EPRFGTAIME EKDLAGLTDA NDELDRIVTQ LLTRRPDIKL LFLVGSCPSE
VIKLDLSRAA LRLSQRFSPG VRILNYSGSG IETTFTQGED SCLASLVPAL PAAQDETSSL
LVIGSLADVV EDQFMRMFDA LGIGPVQFFP PRKSTALPSV GPNTKILMAQ PFLPDTVRAL
QERGAKRLAA PFPLGVEGTT GWLRAAADAF GIDAATFDRV TEPNRVRAER ALGAYKAELG
GRRIFFFPDS QLEIPLARFL ARELSMQLVE VGTPYLHREH LAEELKLLPA GVALTEGQDV
DLQLDRCRLA RPDIAVCGLG LANPLEAEGI TTKWSIELVF TPIQGYEQAA DLAELFARPL
VRRAKLVA
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