| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3980 |
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| Symbol | |
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| ID | 3911787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4545964 |
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| End bp | 4547589 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885884 |
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| Product | light-independent protochlorophyllide reductase subunit B |
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| Protein accession | YP_487584 |
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| Protein GI | 86751088 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.129659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTCA CCGTCTGGAC CTATGAAGGA CCTCCCCATG TCGGCGCGAT GCGAATCGCC
ACCGGGATGG AAGGGCTGCA CTACGTCCTG CACGCGCCGC AGGGCGACAC CTACGCCGAT
CTGTTGTTCA CCATGATCGA GCGCCGCAAC AAGCGGCCGC CGGTGACCTA TACGACGTTC
GCCGCACGCG ACCTCGGTCG CGACACCGCC GAACTGTTCA TGACCGCCGC GCGCGACGCC
TATGCGCGGT TCCAGCCGCA GGCGATGATC GTCGGCGCGT CCTGCACCGG CTCGCTGATC
CAGGACGATC CGGGCGGGCT GGCGAAATCG CTCGGCTTCC CGATCCCGGT GATCGCGATC
GATCTGCCTG CCTATCAGCG CAAGGAAAAC TGGGGCGCCG CCGAAACCTT CTACCAGCTT
GTCCGCGCGC TCGCCGGTCC CAACGCGCCG GCGCCCGGCA CCAAGCGTCC GGAGCGCGCG
GCGGGAGTCC GCCCGAGCTG CAATCTGCTG GGGCCGACGG CGCTCGGCTT CCGCCATCGC
GACGACATCA CCGAAATCAC CGGGCTGCTC GGCAAGCTCG GCATCGATGT CAACGTTGTC
GCCCCGATGG GGTCGACGCC GGCGGATATC GCGCGGCTCG GCGATGCCGA TTTCAACGTG
GTGATGTATC CGGAAATCGC CGGGCAGGCG GCGTCCTGGC TGCACCGCAT CTTCCATCAG
CCGTTCACCA AGACGGTACC GATCGGCGTG TCCGCGACGC GCGACTTCAT TCAGGAAGTG
ACCGCGCTCG CCGGCATCGA TCCCGCGCCG ATGCTGCAGG CCTCGTCGAG CCGGTTGCCG
TGGTACTCGC ATTCGGTCGA CAGCACTTAC CTGACCAACA AGCGCGTCTT CATCTTCGGC
GATGCCACCC ACGCGATCGC CGCGGCGCGG ATCGCGTCGG AAGAGCTCGG CTTCAAGGTG
GTTGGGCTCG GCAGCTACAG CCGTGAGTTC GGCCGCGAGC TGCGCGAAGC CGCGAAGCGT
TACGATGTCG AACCGCTGAT CACCGACGAC TATCTCGAGG TCGAGGCCAA GGTGGCCGAG
CTCCACCCCG AGCTGGTGCT CGGCACCCAG ATGGAGCGCC ACATCGCCAA GCGGCTCGGC
GTTCCCTGCG CGGTGATCTC GGCGCCGGTG CACGTTCAGG ATTTCCCGGC GCGCTACGCG
CCGCAGATGG GCTTCGAAGG CGCCAATGTG ATCTTCGACA CCTGGGTGCA TCCGCTGATG
ATGGGCCTGG AAGAGCATCT GCTGACGATG TTCAAGGACG ATTTCGAATT CAAGGACGGG
GCGATGCCGT CGCATCTCGG GACCGGCCAC GCCGCGCCGG TCGCGGAAGC CGTCGCCGCT
CCGGCTGCCG CTGTCGCGAC CGAATCCGTC GCGACCGGAG TCGCCGCGCC CGACATCGCG
TCGGCAACCG CTGTGGCCGC AGCCGCAGCC GTGTGGGCGC CCGAAGCCGA GAAGGAACTG
CAGAAGATAC CGTTCTTCGT TCGCGGGAAA GCCCGCCGGA ATACCGAGCG ATTCGCCAAC
GAGAATGGCG TCGCAACCAT CACTGTCGAG ACCTTGTACG ATGCAAAAGC GCACTTCGCA
CGCTGA
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| Protein sequence | MQLTVWTYEG PPHVGAMRIA TGMEGLHYVL HAPQGDTYAD LLFTMIERRN KRPPVTYTTF
AARDLGRDTA ELFMTAARDA YARFQPQAMI VGASCTGSLI QDDPGGLAKS LGFPIPVIAI
DLPAYQRKEN WGAAETFYQL VRALAGPNAP APGTKRPERA AGVRPSCNLL GPTALGFRHR
DDITEITGLL GKLGIDVNVV APMGSTPADI ARLGDADFNV VMYPEIAGQA ASWLHRIFHQ
PFTKTVPIGV SATRDFIQEV TALAGIDPAP MLQASSSRLP WYSHSVDSTY LTNKRVFIFG
DATHAIAAAR IASEELGFKV VGLGSYSREF GRELREAAKR YDVEPLITDD YLEVEAKVAE
LHPELVLGTQ MERHIAKRLG VPCAVISAPV HVQDFPARYA PQMGFEGANV IFDTWVHPLM
MGLEEHLLTM FKDDFEFKDG AMPSHLGTGH AAPVAEAVAA PAAAVATESV ATGVAAPDIA
SATAVAAAAA VWAPEAEKEL QKIPFFVRGK ARRNTERFAN ENGVATITVE TLYDAKAHFA
R
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