Gene RPB_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3952 
Symbol 
ID3911759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4512319 
End bp4512759 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content70% 
IMG OID637885856 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_487556 
Protein GI86751060 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.274037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.692006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAG ACAGCCGCCT GTCGTCGGTT CTGCATGCGC TGCTGCACAT GGCGGAGCAC 
GACGCACCGA TGACCTCCGA CCAGCTCGCC GCGTGCATGT GCACCCATCC GGTGGTGGTG
CGGCGGACGA TGGGACTGCT GCGCGAGGCC GGGCTGGTGG CGTCCGAGCG CGGGCCGTCC
GGCGGCTGGC TGATCACCGC CGATCCCGCC GCCGTCACGC TGCGCGACTT GCACCAGGCG
CTCGGCGAGC CGGCGATCTT CGCGATCGGC AATCGCAACG AGACGCCGGA GTGTCTGGTC
GAGCAGGTCG TCAACGCCGC GCTCGACAGC GCCTTCGTCG ACGCCGAGGC GCTGCTGCTC
GAACGCTTCG CCGAGGTGAC GCTGGCGAAG CTGTCGGCGG ATTTCAACCG GCGCCACGCG
GCGCAGCGCG CCCGAAAATA A
 
Protein sequence
MKRDSRLSSV LHALLHMAEH DAPMTSDQLA ACMCTHPVVV RRTMGLLREA GLVASERGPS 
GGWLITADPA AVTLRDLHQA LGEPAIFAIG NRNETPECLV EQVVNAALDS AFVDAEALLL
ERFAEVTLAK LSADFNRRHA AQRARK