Gene RPB_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3931 
Symbol 
ID3911738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4485297 
End bp4485878 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID637885835 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_487535 
Protein GI86751039 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0284288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.826229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGCT CTGTTGCCCG CGTGTTCGTG TTCGCCGCCG CCATCGCCGT CGCGGGGATT 
TTGCCGGCAT CGGCGCAGGA AGACCTGCGC GAGGTGATGG GCTTCGGGCC GTTTTTCCGG
TCCGGCTCCT CCGGCGTGAG CCCGGTGCCG CGCGAATGGG TGCAGTTCAT GGGCAACTAC
GCGCCCGGAA CCATCGTCAT CAGCACCTCC GAGCGGCGGC TGTATCTGGT CGGCGCCGAC
GGAACCGCGC TGCGCTACGG CATCGGCGTC GGCCGCGACG GCTTCCGCTG GTCGGGCACC
CACCGCATCA CCGCGAAAAA GGAATGGCCG AGCTGGACCC CGCCGGCGCA GATGTTGCGC
CGCCGCCCCG ACCTGCCGCG CCATATGGCC GGCGGCGAGG ACAATCCGCT CGGCGCGCGG
GCGATGTATC TCGGCTCGAC GCTGTACCGT ATCCACGGCT CCAACGAGCC GGAGACGATC
GGCCAGGCGG TTTCGTCCGG CTGCTTCCGG ATGACCAATG AGGACGTCAA GGATCTCTAC
GAGCGCGTCC GCGTCGGCAC CACGGTCGTG GTCAAGAACT GA
 
Protein sequence
MVRSVARVFV FAAAIAVAGI LPASAQEDLR EVMGFGPFFR SGSSGVSPVP REWVQFMGNY 
APGTIVISTS ERRLYLVGAD GTALRYGIGV GRDGFRWSGT HRITAKKEWP SWTPPAQMLR
RRPDLPRHMA GGEDNPLGAR AMYLGSTLYR IHGSNEPETI GQAVSSGCFR MTNEDVKDLY
ERVRVGTTVV VKN