| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3930 |
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| Symbol | |
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| ID | 3911737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4483569 |
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| End bp | 4485113 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885834 |
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| Product | hypothetical protein |
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| Protein accession | YP_487534 |
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| Protein GI | 86751038 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.12121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.390263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGTG CCGAAAGTCT GGTGCGGACG CTGGTCCATG GCGGCGTGGA CGTCTGCTTC
ACCAATCCCG GCACCTCGGA AATGCACTTC GTCGCCGCGC TCGACCGCGT CGAGGGCATG
CGCTGCGTGC TCGGCCTGTT CGAGGGCGTG GTCACCGGCG CCGCCGACGG TTATTTCCGG
ATGAAAGGCA CGCCGGCCTC GACGCTGCTG CATCTCGGCC CCGGCCTCGC CAACGGCCTC
GCCAATCTGC ACAACGCCAA GAAGGCGAGT TCCGGCATCG TCAACATCGT CGGCCAGCAC
GCCACCTACC ACATCGACTA CAACGCGCCG CTGACCTCCG ACATCGAGGG CCTGGCGCGG
CCGATGTCGG CCTGGGTCCG CACCTCGCCG GACGCGCAAT CGGTGGCGCG CGACGGCGCC
GCCGCGATTG CCGCCGCGAA GAGCGCGCCG CCGCAGATCG CCACCCTGAT CCTGCCCGCC
GACACCGCCT GGGGCGAGGC CGACGGCATC GCCGAGGTGC CGCAAGACAC CCAGCGCCCG
AGCTATTCGC CGCACGCGGT GGAAGCCGCG GCGCGCGTGC TGCGCTCCGG CGAGCCGACG
CTGCTGCTGC TGACCGGCGG CGCGCTCACC GAACACGGCC TCGAGCTCGC CGCGCGGATC
GCCGGCAAGA CCGGCTGCCG TGTGATGGGC CAGACCTACA ATCCGCGGAT GGCGCGCGGT
CGCGGCCGCT ATGCGATCGA GCGGATTCCC TATGTGATCG AAGCCGCGCT GCCGATCCTG
AAGGACTTCC GCCACATCGT GCTGGTCGAG GCCAACGATC CGGTGGCGTT CTTCGCCTAT
CCGAACAAGC CGAGCCTGCT GAAACCGGAC GGCTGCGAGG TACATCGCAT GACCGAGGGC
GGCGAGAATT CCACCGCAGC GCTCGAAGCG CTGGCCGGCG CGCTCGGCGC CAAGGCGGCC
GACGCCCAGC CGCAGACCCA TGTCGAGATC GCGCGGCCGA GCGGCGCGCT GACCCATGCC
TCGATCGCCC AGGCGATCGC GATGGCGATC CCGGACAACG CCATCGTGAT CGACGAATCG
ATCACTACCG GCCGCGGCTT CTTTCCGCCG ACGGCGGCGG CGGCGCCGCA CGACTGGCTG
CAGAACATGG GCGGCTCGAT CGGGTTCTCG CCGCCGGTCG CGGTCGGCGC CGCGGTGGCG
TGCCCGGATC GCAAGGTGAT CTGCCTGGTC GGCGACGGCA GCGCGATGTA CACGCTGCAG
GCGCTGTGGA CCCAGGCTCG CGAAAATCTC GACGTCACCA CCGTGGTGTT CGCCAACCGC
AAATATCAGA TCCTGCGCGG CGAGTTCGAC GGCGTCGGCG CCGGCGAGCC GGGCCAGCGC
GCGCAGGACA TGCTGTCGCT GGATCGGCCG AACCTCGACT GGGTGTCGCT GGCCCGGGGC
ATGGGCGTGC CGGCCCGCGC CGTGACCAGC GCCGATGAAC TCAACAAGGC GCTCGACGCC
GGCGTCGCCG GCAGCGGTCC GAATTTGATC GAAGTGCAGA TGTAG
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| Protein sequence | MNGAESLVRT LVHGGVDVCF TNPGTSEMHF VAALDRVEGM RCVLGLFEGV VTGAADGYFR
MKGTPASTLL HLGPGLANGL ANLHNAKKAS SGIVNIVGQH ATYHIDYNAP LTSDIEGLAR
PMSAWVRTSP DAQSVARDGA AAIAAAKSAP PQIATLILPA DTAWGEADGI AEVPQDTQRP
SYSPHAVEAA ARVLRSGEPT LLLLTGGALT EHGLELAARI AGKTGCRVMG QTYNPRMARG
RGRYAIERIP YVIEAALPIL KDFRHIVLVE ANDPVAFFAY PNKPSLLKPD GCEVHRMTEG
GENSTAALEA LAGALGAKAA DAQPQTHVEI ARPSGALTHA SIAQAIAMAI PDNAIVIDES
ITTGRGFFPP TAAAAPHDWL QNMGGSIGFS PPVAVGAAVA CPDRKVICLV GDGSAMYTLQ
ALWTQARENL DVTTVVFANR KYQILRGEFD GVGAGEPGQR AQDMLSLDRP NLDWVSLARG
MGVPARAVTS ADELNKALDA GVAGSGPNLI EVQM
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