| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3927 |
|---|
| Symbol | |
|---|
| ID | 3911734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4481684 |
|---|
| End bp | 4482385 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637885831 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_487531 |
|---|
| Protein GI | 86751035 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1814] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.351765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGAC CCGTCCGACC CAAGGAGATC CACCTCGTCA ATCGGATCGG GTGGCTGCGC
GCAGCGGTGC TCGGGGCCAA TGACGGGATC ATCTCGACGG CGAGCCTGAT CGTCGGCGTC
GCCGCGGCGA CACCGAACCG GGACGAGGTG CTGGTAGCCG GCATCGCCGG GCTTGTGGCC
GGCGCAATGT CGATGGCGGC GGGCGAATAC GTCTCGGTGA GCTCGCAATC CGATACCGAA
AACGCCGACC TGCGGCGCGA GGCCCGCGAG CTGCGCGACG ATCCCGGCGG CGAACTCGAC
GAACTCGCCG AGATCTACGT CAAGCGCGGC GTCGACCCGA TGCTGGCCCG ACAGGTGGCG
GCGCAAATGA TGAAGTCGGA TGCGCTCGGC GCGCACGCGC GCGACGAACT CGGCATCACG
CAAACGACGA CCGCCCGGCC GGTGCAGGCG GCCCTGACTT CGGCGCTGAC ATTCACGGTG
GGCGCCGCGA TGCCGCTGTC GATGGTGATC ATCGCGCCTG CGAACCTGCT GATCCAGCTG
ACGTCGGCCG CTTCACTCGG CTTCCTCGCC GTGCTCGGTG CCGTCGGCGC CAAGGCGGGC
GGGGCCGGCA TCTTGCGCGC CACCACCCGC GTGACGTTCT GGGGCGCGCT GGCGTTGGGG
ATCACGGCCG GGATCGGCAG GCTCTTCGGC GCGATTCTCT AG
|
|---|
| Protein sequence | MIRPVRPKEI HLVNRIGWLR AAVLGANDGI ISTASLIVGV AAATPNRDEV LVAGIAGLVA
GAMSMAAGEY VSVSSQSDTE NADLRREARE LRDDPGGELD ELAEIYVKRG VDPMLARQVA
AQMMKSDALG AHARDELGIT QTTTARPVQA ALTSALTFTV GAAMPLSMVI IAPANLLIQL
TSAASLGFLA VLGAVGAKAG GAGILRATTR VTFWGALALG ITAGIGRLFG AIL
|
|---|
| |