Gene RPB_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3917 
Symbol 
ID3911722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4468960 
End bp4470126 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content69% 
IMG OID637885819 
Productchemotaxis-specific methylesterase 
Protein accessionYP_487521 
Protein GI86751025 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.867387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAG CTCTGGCAGG AAGTCCGGCC ATCAATGCGA CGCAGTATGA ACCGCTGCGG 
GTGATGGTCG TCGACGATTC GGTGGTGATT CGCGGGCTGA TCTCGCGTTG GATCGAGGCC
GAGCCCGACA TGGTCGTCGC GGCCTCGCTG CGCACCGGGC TCGACGCGGT CAATCAGGTC
GAACGCATCA AGCCGGACAT CGCCCTGCTC GACATCGAGA TGCCCGAGCT CGACGGCATC
GCCGCGCTGC CGCAATTGCT GGCCAAGAAG CGCGACCTGA TCGTCATCAT GGCGTCGACC
CTGACGCGCC GTAACGCCGA GATCAGCTTC AAGGCGCTGT CGCTCGGCGC CGCCGACTAC
ATTCCGAAGC CGGAGACGAC CCGCGAATCC GCCGGCGCCG AGGTGTTCAG GCACGACCTG
CTGCAGAAGA TCCGCCATCT CGGCGGCAAG GTGCGGCGCA GGGTCTCGGC GCCGAGCGCC
AGCGCGCCCA TGGTCGCGCG CGTTCGCGAG GCGGCCGCAG CACCGGCCGC GCCGAGCGTC
GCCAGTCAGG CGGCGCTGGT GAAGCGTGCG TTCGGCCCGA CGGCGCCGCG CGTGCTGCTG
ATCGGGTCCT CGACCGGCGG GCCGCAGGCG CTGATGTCGC TGGTCGCCGA GATCGGTCCG
GTGATCGACC GCTATCCGGT GCTGATCACG CAGCATATGC CGCCGACCTT CACGACGATT
CTCGCCGAAC ATCTGATGCG CGCCGCCCGG CGGCCGGCGC ACGAGGGCGT CGACGGCGAA
CTGATCAAGC CGGGCCGGAT CTATCTGGCC CCCGGCGGTC GCCACATGCG GGTGACCCGC
CAGGGCGGAC AGCCCGCGAT CGCGCTCGAC GACGGCCCGG CGGTGAATTT CTGCAAGCCC
GCGGTCGACC CGCTGTTCAC CTCGGCGATC GACGTCTGGC AGGGCGGGAT CATGGCGGTG
GTGTTGACCG GAATGGGGTC CGACGGCATG CGCGGCGGCA AGGACATCGT CGCCGCCGGC
GGCAGCGTGA TCGCCCAGGA CGAGGCCAGC AGCGTGGTGT GGGGCATGCC CGGCGCGGCG
GCGAATGCCG GCATCTGCGC CGCGGTGTTG CCGCTCAATC AGATCGGGCC GAAGCTCGTA
CGTTTGTTTT CAGGAGATCG GTCGTGA
 
Protein sequence
MSVALAGSPA INATQYEPLR VMVVDDSVVI RGLISRWIEA EPDMVVAASL RTGLDAVNQV 
ERIKPDIALL DIEMPELDGI AALPQLLAKK RDLIVIMAST LTRRNAEISF KALSLGAADY
IPKPETTRES AGAEVFRHDL LQKIRHLGGK VRRRVSAPSA SAPMVARVRE AAAAPAAPSV
ASQAALVKRA FGPTAPRVLL IGSSTGGPQA LMSLVAEIGP VIDRYPVLIT QHMPPTFTTI
LAEHLMRAAR RPAHEGVDGE LIKPGRIYLA PGGRHMRVTR QGGQPAIALD DGPAVNFCKP
AVDPLFTSAI DVWQGGIMAV VLTGMGSDGM RGGKDIVAAG GSVIAQDEAS SVVWGMPGAA
ANAGICAAVL PLNQIGPKLV RLFSGDRS