| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3916 |
|---|
| Symbol | |
|---|
| ID | 3911721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4468094 |
|---|
| End bp | 4468963 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637885818 |
|---|
| Product | MCP methyltransferase, CheR-type |
|---|
| Protein accession | YP_487520 |
|---|
| Protein GI | 86751024 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.186094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.509616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCCGC TGGACTACGA ATATCTGCGC AAGGCGTTGA AGGACCGCTC CGGGCTCGAT
CTGTCGATCG ACAAGCAGTA CCTCGTCGAA AGCCGGCTGC TGCCGCTGGC GCGGCGCTAC
GGGCTCTCCG GCATCCCCGA CCTCGTCCAG AAGATGAAGG GCGGCGCCGA CAAGATGACG
GCCGAAGTGG TCGAGGCGAT GACCACCAAC GAGACGTTCT TCTTCCGCGA CAAGCTGCCG
TTCGATCATC TGCGCGAAGA GATCCTGCCG GCGCTGCTGC AGGCCCGCGC CGGACGGCGA
TCCTTGCGGA TCTGGTGCGC GGCATCCTCG ACCGGGCAGG AGCCTTATTC GATCGCGATG
TGCCTGAAGG AGCTCGGCCC CGCCGTCGCC GGCTGGCGCT TCGAGATCGT CGCGACCGAT
CTGTCGCCCT CGGTGCTGGA GAAGTCGAAA TCCGGCCTGT TCACCCAGTT CGAGGTGCAG
CGCGGATTGC CGATCCAGTT GCTGGTGAAG TACTTCAAGC AGACCGGCGA GCTGTGGGAG
ATCAGCCCCG AGCTCCGTGC CATGATCCAG CACCGCCAGT TCAACCTGCT GCAGGACTAC
GGCCAGCTCG GCATGTTCGA CGTGATCTTC TGCCGCAACG TGCTGATCTA TTTCGATCAG
GCGACCAAGA TCTCGATCTT CGAGCGGCTC GCCAAGCGGC TCGAGCCCGA CGGCTATCTC
GCGCTCGGCG CCGCCGAAAC CGTGGTCGGC CTGACCGACG CGTTCAAGCC GCATCCGACA
AGGCGCGGGA TCTATCTGCC GAACACCAAG TCGCCGTCGA TCGTGCCGGC GGCCAAGCCG
GCCCTGGCCA GCGCCGGGTT CGGACGCTGA
|
|---|
| Protein sequence | MTPLDYEYLR KALKDRSGLD LSIDKQYLVE SRLLPLARRY GLSGIPDLVQ KMKGGADKMT
AEVVEAMTTN ETFFFRDKLP FDHLREEILP ALLQARAGRR SLRIWCAASS TGQEPYSIAM
CLKELGPAVA GWRFEIVATD LSPSVLEKSK SGLFTQFEVQ RGLPIQLLVK YFKQTGELWE
ISPELRAMIQ HRQFNLLQDY GQLGMFDVIF CRNVLIYFDQ ATKISIFERL AKRLEPDGYL
ALGAAETVVG LTDAFKPHPT RRGIYLPNTK SPSIVPAAKP ALASAGFGR
|
|---|
| |