Gene RPB_3915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3915 
Symbol 
ID3911720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4466819 
End bp4467976 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content64% 
IMG OID637885817 
Productglutathionylspermidine synthase 
Protein accessionYP_487519 
Protein GI86751023 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0754] Glutathionylspermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.402968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGA TCGCCTGCGC AGAACGCGAC GACTGGGAAG CCACGGCCGC CGGCTGCGGA 
TTCAATTTCC ATAGCGCCTC CGGCCAGCGC TATTGGGACG AGCGCACCTA CTACGCGTTC
ACGCTCGACG AAATCGAGCG GCAGATCGAA GCGCCGACGG CAGAGCTCGA CGCGATGTGC
CTTGACCTCG TGGACCGGGC CATTCGCGAC GAGCCCATGC TTCGTCGCCT CAACATTCCG
GAACAATATT GGTCGTTCAT CGCCACGAGC TGGCGTCGCG GCGATCCCAG CCTGTACGGC
AGGCTCGACC TCCGTTTCGA CGGCCGCGAT CCCGCGAAGC TACTCGAATA CAATGCGGAT
ACGCCGACGT CTCTGTTCGA GGCCGCGGTC TTTCAATGGA CGTGGCTCGA GCAGGCGACC
GCACGGCAGA TCATTCCGAA ACGCGCCGAC CAGTTCAATT CGTTGCACGA ACGGCTGATC
GCGGCCTGGC GTCGCTTCGC CGGCGGCCGG CGGCTCCACC TCACCGGCAC GCTGAGCAGC
GCCGAAGACA GCGGCACACT GCACTATCTC ATGGACGTCG CGCAGCAAGG CGGCGTCGAG
ACCGTGCTGA TCGACATCGC CGACATCGGA TGGCGAAGCG GCGGCGGCTT CGTCGATCTG
CAAGACCGCA ACATCGAGCT GGCGTTCAAG TTGTACCCGT GGGAGTGGCT GTTTCGCGAA
GCCTTCGGCC CCCGGCTTGC CGAGGCGCAG ACCGGCTGGA TGGAGCCGCC ATGGAAAGCC
ATCCTGTCCA ACAAGGGCAT CCTGCCTCTG TTGTGGAAGA TGCACCCCGG ACACCCGAAT
CTGCTGCCGG CCTATTTCGA GGACGATCCC GAGGCGGGGC AATTGGGAGC ATCCTTCGTG
CGCAAGCCGC TGTACTCGCG CGAAGGCGCC AATATCACGC TCGTCAACGA CGGTGCGATC
GAAGCGGCCG AGGACGGCCC CTATGGAGCA GAAGGCTACA TCCGCCAGGC CGCCGATCCG
CTGCCGAATT TTTCAGGGCA GCACCCGGTG CTGGGAAGCT GGCTGGTCGA TGGCTCGCCC
TGCGGGCTGT CAATTCGCGA GGACGACAGC CTGATCACCG GCAACACGTC GCGCTTCGTG
CCGCACGCGA TCTTGTAG
 
Protein sequence
MRRIACAERD DWEATAAGCG FNFHSASGQR YWDERTYYAF TLDEIERQIE APTAELDAMC 
LDLVDRAIRD EPMLRRLNIP EQYWSFIATS WRRGDPSLYG RLDLRFDGRD PAKLLEYNAD
TPTSLFEAAV FQWTWLEQAT ARQIIPKRAD QFNSLHERLI AAWRRFAGGR RLHLTGTLSS
AEDSGTLHYL MDVAQQGGVE TVLIDIADIG WRSGGGFVDL QDRNIELAFK LYPWEWLFRE
AFGPRLAEAQ TGWMEPPWKA ILSNKGILPL LWKMHPGHPN LLPAYFEDDP EAGQLGASFV
RKPLYSREGA NITLVNDGAI EAAEDGPYGA EGYIRQAADP LPNFSGQHPV LGSWLVDGSP
CGLSIREDDS LITGNTSRFV PHAIL