| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3909 |
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| Symbol | |
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| ID | 3911714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4462199 |
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| End bp | 4462747 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637885811 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_487513 |
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| Protein GI | 86751017 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0477634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACGT CGGCTGAGTT GGTCTGGCTG CTTGCCGCTG TGGCCAAAGG GGATCAGGCA
GCCTTCGAGC GGCTCTACAA CGCCACGCGC GCGAAACTCT ACGGCGTGGT TCTGCGTATC
TTGAGACGTC AGGATCTCGC GGAAGAAGTC ATCCAGGAAA CGTACGTCAA GATCTGGAAC
AGCGCCGGAA CGTTCAATCC CGGCGTGGCG TCGCCGATCA CCTGGATGGC GTCGATCGCG
CGGAACCGGG CCATCGACGT GGCGCGCAAG CGCAGCGAGG TTTCGATCGA GGACGAGCCT
GCGGCGCAGG AAGCCGCGGC GGATTCGCCG GATCCGCTGG CGCGCCGGGA GATGACTGAA
GAATTGAAGC GGCTGCTCGA ATGCGTCGGC CGGCTGGAGC CGGATCGCCA GAAGCTCGTG
CTGCTCGCTT ACTACAATGG TTGGAGCCGC GAACAGCTCG CGGCGAAATT CGATGCGCCG
GTGAACACGG TCAAGACTTG GCTGCGTCGC AGCCTGCTCG ATATCCGGGA GTGTCTGGGA
CTCGTCTGA
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| Protein sequence | MLTSAELVWL LAAVAKGDQA AFERLYNATR AKLYGVVLRI LRRQDLAEEV IQETYVKIWN
SAGTFNPGVA SPITWMASIA RNRAIDVARK RSEVSIEDEP AAQEAAADSP DPLARREMTE
ELKRLLECVG RLEPDRQKLV LLAYYNGWSR EQLAAKFDAP VNTVKTWLRR SLLDIRECLG
LV
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