Gene RPB_3898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3898 
Symbol 
ID3911702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4453463 
End bp4453993 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content69% 
IMG OID637885799 
Productflavin reductase-like, FMN-binding 
Protein accessionYP_487502 
Protein GI86751006 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.69994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGG CCATGACGCC CACGGTCGAG CGCGACGAAT TTCGCGAGGC GATGAGCCGG 
CTCGGCGCCG CGGTCAACAT CATCACCACC GACGGCGCGG CCGGGCTGCA CGGCTTGACC
GCCTCGGCGG TGTGCAGTGT CACCGACGAT CCGCCGACGT TGCTGGTCTG CGTCAACCGC
GCCTCCAACG TCCATGCGGC GCTGTCGCAG AACGGCGTGC TGTGCGTCAA CGTGCTGGCG
AGCCGGCATC AGGAATTGTC GACTCTGTTC GGTCGCGGCG GCATCCCGGT GGAGCAGCGC
TTCGCCGGAG CCGAATGGCG GGTGCTGACG ACCGGCGCGC CATCGCTCGC CGACGCCGTG
GTCAGCCTCG ATTGCGCGAT CGCGCAGACC ACCGAGATCG GCACCCACAG CGTGTTCTTC
TGCCGCGTCC GGGCGATCGC GCTCGGCGCG CAGCCGGAAG GGCTGATCTA CTTCAACCGC
TCCTATCACG ACCTCGCGCC GGCGCAGCGC GACCTGTGCC ACCAGGACTG A
 
Protein sequence
MKQAMTPTVE RDEFREAMSR LGAAVNIITT DGAAGLHGLT ASAVCSVTDD PPTLLVCVNR 
ASNVHAALSQ NGVLCVNVLA SRHQELSTLF GRGGIPVEQR FAGAEWRVLT TGAPSLADAV
VSLDCAIAQT TEIGTHSVFF CRVRAIALGA QPEGLIYFNR SYHDLAPAQR DLCHQD