| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3897 |
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| Symbol | |
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| ID | 3911701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4452690 |
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| End bp | 4453454 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885798 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_487501 |
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| Protein GI | 86751005 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC CCTCCGCCAA CAGCGAAGGA CGCGTCGCGC TGGTCACCGG CGGCGGCAAC
GGGCTCGGCG AGATCATCGC CGGCGCGCTG CACGGCGCGG GCTATCGGGT CGCCGTCGCC
GACATCGACG AAGCTGCGGC GCAGACCGTC GCAACGCGGC TGGACCCGGG CGGACAAACG
GCGATCGCGC TGCATCTCGA CGTCCGCCTC AAAGGCGATT TCGAGGCCGC GCTGGCGGCG
CTGCTGGCGC GCTGGGGTGG CGCCCACGTC CTCGTCAACA ACGCCGCCGT CACCGTGGCG
CGGCCGGTGA TGGAGATCTC GCCGGAGGAA TTCGACGCGG TGATCGCGGT CAATCTGCGC
GGCACGTTTC TCGGCTGCCA GGTGTTCGGC GCTTACTTCC GCGATGCCGG GCACGGCCGC
ATCGTCAACA TGGCCTCGCT CGCCGGCCAG AACGGCGGCA CCGCCACCGG CGCGCACTAT
GCGGCATCGA AGGGCGGCAT CGTCACGCTG ACCAAAGTGT TCGCGCGCGA TCTCGGCAAG
GCCGGCGTCA CCGTCAATGC GATCGCGCCG GGGCCGCTCG ATCTGCCGAT CGTGCACAAG
ACGGTGCCGG CCGAGCGCTT CGCCGAGTTC AAGGCGAACA TTCCGGTCGG CGATATCGGC
GATCCGAAAT TTGTCGCGCA GCTGGTGCTG CAACTGGCGT CGCCCGAATC CGGCTTCGTC
TCCGGCGCGA CCTGGGACGT CAATGGCGGG CTGTTCATGC GATGA
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| Protein sequence | MSAPSANSEG RVALVTGGGN GLGEIIAGAL HGAGYRVAVA DIDEAAAQTV ATRLDPGGQT
AIALHLDVRL KGDFEAALAA LLARWGGAHV LVNNAAVTVA RPVMEISPEE FDAVIAVNLR
GTFLGCQVFG AYFRDAGHGR IVNMASLAGQ NGGTATGAHY AASKGGIVTL TKVFARDLGK
AGVTVNAIAP GPLDLPIVHK TVPAERFAEF KANIPVGDIG DPKFVAQLVL QLASPESGFV
SGATWDVNGG LFMR
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