| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3881 |
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| Symbol | |
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| ID | 3911685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4435730 |
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| End bp | 4436419 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885782 |
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| Product | ABC transporter related |
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| Protein accession | YP_487485 |
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| Protein GI | 86750989 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.770849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAAG TCCTGCGCCT CGACGGCATC CGCAAATCCT ACAATGTCGG CACCCCGGTC
GAGACCGAGG TGCTGCACGG CATCGACCTG ACCTTGCAGG CGCGCGACTT TCTGGCGCTG
ATGGGGCCGT CCGGCTCGGG TAAATCGACG CTGCTCAACA TCATCGGCCT GCTCGACCGG
CCGACCGCCG GCCGGCTCGC GATCAACGGC GAGGACACCG GCGAGCTCGG CGATGCCGCG
CTGACGCAGC TTCGCGGCCG CGCCATCGGC TTCGTGTTCC AGTATCACTA TCTGATCTCG
GCCTTCACCG CGCGCGAGAA CGTGATGATG CCGATGCTGG TCGATCGCGG CCGTCCGGAC
AGCGCGATGG AGCGCCGCGC CGACGAACTG CTCGACCGCG TCGGCTTGAG CCGCTGGCGC
AACAACAGCG CCAACAACAT GTCGGGCGGC CAGCAGCAGC GTGTCGCCAT CGCGCGCGCG
CTGGCGATGG ACCCCGACCT CGTGCTCGCC GACGAGCCGA CCGGCAATCT CGACACCAAA
TCCGCCGACG ACGTGTTCGC GCTGATGCGC GAGATCAACC GCGAACGCGG CACCACGTTT
CTGCTGGTGA CCCACAATGA CGACCTCGCC GCAAGATGCG ACCGCATCGT GCGCGTCGTG
GATGGGGTGA TCGCAGGCGA GGGTAATTAG
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| Protein sequence | MAEVLRLDGI RKSYNVGTPV ETEVLHGIDL TLQARDFLAL MGPSGSGKST LLNIIGLLDR
PTAGRLAING EDTGELGDAA LTQLRGRAIG FVFQYHYLIS AFTARENVMM PMLVDRGRPD
SAMERRADEL LDRVGLSRWR NNSANNMSGG QQQRVAIARA LAMDPDLVLA DEPTGNLDTK
SADDVFALMR EINRERGTTF LLVTHNDDLA ARCDRIVRVV DGVIAGEGN
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