Gene RPB_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3880 
Symbol 
ID3911684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4434993 
End bp4435481 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID637885781 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_487484 
Protein GI86750988 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.405421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG TCGTTCTGAA CCGCCGCAAG CTCCTCGTGG CCAGCGGTTC CTTGCTGGCA 
GCCGGCATGT CCGGGCTGTG GCTACCTGCC CGCGCCGAAG GGCTCTCGCC GACCCCGTCG
ATGTCGGGCG GGGCCAACAA TTATCGCAAA GGTGCTCCGA TCGTCGATCG GATCGGCGCG
GGTGGATTCT GGATGCGCGG CACCGTTCGC CGTGCAGGTG ACGGTGCGCC GCTCGCCGGG
CAGCGGATCC AGATCTGGGC GCATACGGTC GAAGGGCAGG AGCACGAGCA GCGCAGTCAC
GGCGCCACGC TCACCGACAA GAACGGCGCG TTCCGTCTCG AGATGCCGCA GATCATTCCG
GTGTTCGGCC AGCCGCATGG CCACCTCGCT TACGACAGCG GCGAGTTCAA GACCGTGTTC
CTGCGTCCGG TCATGCGCAG CACCAAAGAC ACCAGCCTGG AAGCCCATTT CGTCCTGCAG
CCGGCCTGA
 
Protein sequence
MSTVVLNRRK LLVASGSLLA AGMSGLWLPA RAEGLSPTPS MSGGANNYRK GAPIVDRIGA 
GGFWMRGTVR RAGDGAPLAG QRIQIWAHTV EGQEHEQRSH GATLTDKNGA FRLEMPQIIP
VFGQPHGHLA YDSGEFKTVF LRPVMRSTKD TSLEAHFVLQ PA