| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3871 |
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| Symbol | |
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| ID | 3911675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4424838 |
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| End bp | 4427564 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885772 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_487475 |
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| Protein GI | 86750979 |
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| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
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| COG ID | [COG2217] Cation transport ATPase
[COG3350] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACA CAGAGCACAC CGGGGGCAGC ACGGCTGTCA AGGATGCGGG TTGCGGATGC
TCGGCGGAGG CAGCTGTTCC TGCGCCGCCT GCGGCGTCGT CCTGTTGCGG CCGCCACGCG
AGCGATCAGC CGATCTCACC TGCGTCCGCC AAGGCGATCG ATCCCGTCTG CGGCATGACC
GTCGACCCGG CGTCCAGCAA GCATCGCTTC GACCACGCCG GCACCACCTA TCACTTCTGC
TGCGCCGGAT GCCGCACCAA ATTCGCGGCC GACCCGGAAG GCATTCTGGC CAAAGCCGCC
AGGCCGACTG CGGCGCCCAA GCCCGCAGCG CAATTGCATC AACTGACCGA CTTCGCCGCA
CCGTCGTCCT GCTGCGGCGG GCATGATCAT GCCGCACATC ACCACGATCA CGGCGCGACT
GCAGCAGCCG ACGGCAAGGT GATCGATCCG GTCTGCGGCA TGAAAGTGGA CCCGGCGACC
ACGCCGCATC GGTTCGATTA CCAGGGCCAG ACCTATTTCT TCTGCGCGGC GAGCTGCCGC
GGCAAATTCG CCGCCGATCC CGTCTCCTAT CTCGACAAGT CGAAAGCGAA GCCGGCGCCG
GTGGTGCCGG AGGGCACGAT CTACACCTGC CCGATGGATC CGCAGATCCG TCAGGTCGGC
CCGGGAAGCT GCCCGATCTG CGGCATGGCG CTCGAACCCG AGCTGGTGTC GCTCGACGCG
CCGCCGAATG CCGAACTGAT CGACATGACC CGGCGTTTCT GGATCGGCCT CGCGCTGGCG
CTGCCGGCGG TCGTGCTGGA AATGGGCGGC CACCTCGTTG GTGGTCACGG CTTGATCGAT
CCTGCGCTGT CGAATTGGAT CCAGCTCGCC TGCGCGACGC CGGTCGTGCT GTGGGCCGGC
TGGCCGTTCT TCGTCCGCGG CTGGCAGTCG CTGGTCACGC GCAACCTCAA CATGTTCACG
CTGGTCGCGA TGGGCACCGG CGTCGCCTAT GTCTACAGCC TGGTCGCGAC GCTGGCGCCG
CAGCTGTTCC CACCGGCCTT CCAGAGCCAT GGCGGCAGCG TGCCGGTGTA TTTCGAGGCC
GCAGCGGTGA TCACCGTGCT GGTGCTGCTC GGCCAGGTGC TCGAACTGCG CGCCCGCGAG
GCGACCTCCG GCGCGATCAA GGCACTGCTC ACCCTCGCGC CGAAATCCGC ACGGCGAATC
GCGGCGGACG GGACCGACCA CGAGGTCGAG ATCGACAGCC TCGCGGTCGG CGACAAGCTC
CGCGTCCGCC CCGGCGAAAA GGTGCCGGTC GACGGCATCA TCCTCGAGGG ACGCTCGACG
CTCGACGAAT CGCTGGTGAC CGGCGAATCG ATGCCGGTGA CGCGCGAGGC CGGCGGCAAG
GTCGTCGCCG GAACGCTCAA CCAGGCCGGC GGCTTCGTGA TGCGCGCCGA ACAGGTCGGC
CGCGACACCG TGCTGTCGCA GATCGTGCAG ATGGTGGCGC AGGCGCAGCG ATCGCGCGCG
CCGATCCAGC GCGTCGCCGA CCTCGTCGCG GGCTGGTTCG TGCCGGCCGT GGTGCTGGCC
GCGCTGGTCG CGTTCGCCGC CTGGGCGACC TTCGGCCCCG AGCCGCGGCT GACCTTCGCG
CTGGTCGCCG CGGTCAGCGT GCTGATCATC GCCTGCCCGT GCGCGCTCGG TCTCGCCACG
CCGATGTCGA TCATGGTCGG CGTCGGCCGC GGCGCGCAGG CCGGGGTGCT GATCCGCAAC
GCCGAAGCGC TGGAGCGGAT GGAGAAGGTC GACACGCTGG TGATCGACAA GACCGGCACG
CTGACCGAAG GCAAGCCGAA GGTGGTGGCG ATCGCCACCG CGAGCGGCTT CGACGAGGCC
GAATTGCTGC GGCTCGCGGC CGGCGTCGAA CGCGCCAGCG AACACCCGCT CGCGCACGCC
ATCGTCACCG CCGCCAGTGA TCGCAGTCTC GACCTCGCGC CGGTCGACGG GTTCGAGGCG
CCGACCGGCA AGGGCGCGAC CGGCCGGGTC GCCGGCCGTT CGGTCGTGAT CGGCAACGTC
GACTATCTCG CTTCGCTCGG GATCGACACG GCCCCGCTCG CCGACATAGC GGAGCATCAC
CGCGCCGACG GAGCCACCGT GGTCAGCGTC GGCATCGACG GGCGGTTCGC CGGATTGATC
GCGATTGCCG ATCCGGTGAA AGCATCGACG CCGGACGCGT TGCGCGCACT CGCCGCCGAA
GGCCTCCGGG TGATCATGCT GACCGGCGAC AACCGAACCA CGGCGCAGGC CGTCGCCCGA
AAACTCGGCA TCGCCGATGT CGAAGCCGAG GTCCTGCCCG ATCAGAAGAG CGCGGTGGTC
GAAAAGCTGC GCAAGCAGGG CCGCATCGTC GCGATGGCCG GCGACGGCGT CAACGACGCT
CCGGCATTGG CCGCCGCCGA TGTCGGCATC GCGATGGGAA CCGGAACCGA CGTGGCGATG
GAGAGCGCGG GCATCACGCT GCTGAAGGGC GACCTTGGCG GCATCGTTCG CGCGCGAAAA
CTGTCCCAGG CGACGATGCG CAATATCCGG CAGAATCTGT TCTTCGCCTT CATCTACAAT
TCGGCTGGAA TCCCGATCGC CGCCGGCATT CTGTATCCGA GCTTCGGCCT GCTGCTGTCG
CCGATCATCG CCGCAGCGGC AATGTCGCTG TCGTCGGTCA GCGTGATCGG CAATGCCCTG
CGGCTGCGCG CCACCTCGCT GGATTGA
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| Protein sequence | MHDTEHTGGS TAVKDAGCGC SAEAAVPAPP AASSCCGRHA SDQPISPASA KAIDPVCGMT
VDPASSKHRF DHAGTTYHFC CAGCRTKFAA DPEGILAKAA RPTAAPKPAA QLHQLTDFAA
PSSCCGGHDH AAHHHDHGAT AAADGKVIDP VCGMKVDPAT TPHRFDYQGQ TYFFCAASCR
GKFAADPVSY LDKSKAKPAP VVPEGTIYTC PMDPQIRQVG PGSCPICGMA LEPELVSLDA
PPNAELIDMT RRFWIGLALA LPAVVLEMGG HLVGGHGLID PALSNWIQLA CATPVVLWAG
WPFFVRGWQS LVTRNLNMFT LVAMGTGVAY VYSLVATLAP QLFPPAFQSH GGSVPVYFEA
AAVITVLVLL GQVLELRARE ATSGAIKALL TLAPKSARRI AADGTDHEVE IDSLAVGDKL
RVRPGEKVPV DGIILEGRST LDESLVTGES MPVTREAGGK VVAGTLNQAG GFVMRAEQVG
RDTVLSQIVQ MVAQAQRSRA PIQRVADLVA GWFVPAVVLA ALVAFAAWAT FGPEPRLTFA
LVAAVSVLII ACPCALGLAT PMSIMVGVGR GAQAGVLIRN AEALERMEKV DTLVIDKTGT
LTEGKPKVVA IATASGFDEA ELLRLAAGVE RASEHPLAHA IVTAASDRSL DLAPVDGFEA
PTGKGATGRV AGRSVVIGNV DYLASLGIDT APLADIAEHH RADGATVVSV GIDGRFAGLI
AIADPVKAST PDALRALAAE GLRVIMLTGD NRTTAQAVAR KLGIADVEAE VLPDQKSAVV
EKLRKQGRIV AMAGDGVNDA PALAAADVGI AMGTGTDVAM ESAGITLLKG DLGGIVRARK
LSQATMRNIR QNLFFAFIYN SAGIPIAAGI LYPSFGLLLS PIIAAAAMSL SSVSVIGNAL
RLRATSLD
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