Gene RPB_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3870 
Symbol 
ID3911674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4424509 
End bp4424784 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content62% 
IMG OID637885771 
Producthypothetical protein 
Protein accessionYP_487474 
Protein GI86750978 
COG category[S] Function unknown 
COG ID[COG1937] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.863177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGG ACATCAAGGC GTCATGTCAG AAGCGCCTCG GCAGGATCGA GGGGCAGGTG 
CGCGGCATCT CCAAAATGCT GGAGGAGGGC CGCTATTGCA TCGACATCGT CACGCAGATC
TCCGCGGTCC GCGCGGCGCT GCGTCGGGTC GAGGAAGAGG TGCTGAAGGA TCACGTCGCG
CATTGCGTCG AACATGCGAT CGCAAGCGGC GACAAGGCCG ATCAGCGCCA GAAGATCGCC
GAACTGATGG ATGTGATCCA GCGGTCCAGC CGCTGA
 
Protein sequence
MKSDIKASCQ KRLGRIEGQV RGISKMLEEG RYCIDIVTQI SAVRAALRRV EEEVLKDHVA 
HCVEHAIASG DKADQRQKIA ELMDVIQRSS R