| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3865 |
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| Symbol | |
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| ID | 3911669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4420208 |
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| End bp | 4421557 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885766 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_487469 |
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| Protein GI | 86750973 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.955864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCTG CCCTCGACAA ATACGCCAAG AGCTCGGTGC CGCGCTACAC CAGCTATCCG
ACGGCGCCGC ATTTCGCCAA GGATTTTCCG GAGGCCGTGT ATCGTGGCTG GCTCGCCCAG
CTCGACACCG ACGAGCCGAT CTCGCTTTAT CTCCATGTGC CGTTCTGCAA GCAGATGTGC
TGGTACTGCG GCTGCAACAT GAAGCTGGCG TCGAAATACG GGCCGGTCGC CGACTATGTC
GAGAGCCTGA TCAACGAGAT CGATCTGGTC GCCGATGCGA TGCCCGGCAC GATGCCGGTC
CGCCATCTGC ATTTCGGGGG CGGCACGCCG ACGGTGATCG AGCCCGAGGA CCTCGGCGCG
ATCATGACGC TGCTGCGCGA GCGCTTCGAA TTCGTGCCCG ATGCGGAGCT CGCGATCGAG
AGCGATCCGC GCACCCTGAC CGACGAGATG GTCGCCAAGA TCGGCGAACT CGGCTTCACC
CGCGCCAGCT TCGGCGTCCA GGAGTTCGAC CCCAAGGTCC AGGCGGCGAT CAACCGGATT
CAGCCGCCGG AGATGGTCGC GCACGCCATG AGCCGCTTCA AGGCGGCCGG CGTCGAGCGG
ATCAATTTCG ACCTGATCTA CGGCCTGCCC TATCAGACCG CCGAAGATCT GCGTAGCACC
GTCGAGCAGT GCGTCGAGAT GAAGCCCGAC CGCGTCGCGC TGTTCGGCTA CGCCCATGTG
CCGTGGGTCG CCAAGAACCA GCGGATGATC CCGGACGATT CGCTGCCGCA GTCGGATCTG
CGCGCCGAGC AGGCCGACGC CGCCGCCGAG GCGCTGGTCA AGGGCGGCTA TGTGCGGATC
GGCATCGATC ACTTCGCGCT GCCCAAGGAT TCGCTGGCGA TCGCCGCCGC GACCGGCGAA
CTGCACCGCA ATTTTCAGGG CTACACCAGC GACGCGGCGC AGACCCTGAT CGGGATCGGC
GCCACCTCGA TCGGTCGGAC CCCGAGCGGC TATCTGCAGA ACATCAGCGA GACCGGCGCC
TGGGCGCGCG CCGTCGCGGC CGGCCAGTTG CCGGTGGCGC GCGGGCACGC CCTGACCCAG
CAGGACAATC TGCGGGCGCA TGTGATCGAA CGGATCATGT GCGACGGCAA GATCGACCTC
GCCGCCGCCG GCCGCGCTTT CGGCTGCAGC GATGATTGGT ATGCGCCCGA GCAGGATGCG
CTCGCCGAGC TGCAGCGCGA CGGCGCCGTG ATCTGCGACC AGGGCAAGCT GACGCTGACG
CCGGACGGCG TCCGGCTGTC ACGCGTGGTC GCCGCGGTGT TCGATACCTA CCTGCGGAAT
TCGTCGGTGC GGCATTCCAT CGCCGTCTGA
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| Protein sequence | MSSALDKYAK SSVPRYTSYP TAPHFAKDFP EAVYRGWLAQ LDTDEPISLY LHVPFCKQMC
WYCGCNMKLA SKYGPVADYV ESLINEIDLV ADAMPGTMPV RHLHFGGGTP TVIEPEDLGA
IMTLLRERFE FVPDAELAIE SDPRTLTDEM VAKIGELGFT RASFGVQEFD PKVQAAINRI
QPPEMVAHAM SRFKAAGVER INFDLIYGLP YQTAEDLRST VEQCVEMKPD RVALFGYAHV
PWVAKNQRMI PDDSLPQSDL RAEQADAAAE ALVKGGYVRI GIDHFALPKD SLAIAAATGE
LHRNFQGYTS DAAQTLIGIG ATSIGRTPSG YLQNISETGA WARAVAAGQL PVARGHALTQ
QDNLRAHVIE RIMCDGKIDL AAAGRAFGCS DDWYAPEQDA LAELQRDGAV ICDQGKLTLT
PDGVRLSRVV AAVFDTYLRN SSVRHSIAV
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