Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3863 |
Symbol | |
ID | 3911667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4417756 |
End bp | 4419498 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637885764 |
Product | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
Protein accession | YP_487467 |
Protein GI | 86750971 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0582854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.393497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTCACT GTTTCTTGAC AATTATGGGA GAAATGTCAG TGCGCATCCT TCTGATTCAC CCGAATTATC ATTCCGGTGG TGCCGAGATC GCCGGCAACT GGCCGCCGGC ATGGGCCCCC TATCTCGCGG GCGCGCTGAA GGCCAACGGG TTCACCGACA TCAAGTTCAT CGATGCGATG ACCGAGGATA CGTCGGACGA ACAGCTGGCC AAGATCGTCG CCGACTACCA GCCCGATCTG GTCGGCGCGA CCTCGATCAC GCCGTCGATC TACAAGGCCG AGGAGGCCCT GAAGGTCGTC AAGCAGGTGA ACCCCAAGAT CGTCACCATG CTCGGCGGCG TGCACGCGAC CTTCATGTAT CAGCAGGTGC TGACTGAAGC GCCGTGGGTG GACGTGATCG TGCGCGGCGA AGGCGAGGAG ATCGTCGTCG AACTCGCGCG GGCCGTCGCC TCCGGCAACT GGCCGGCCAA TCGCGATGCG ATCAAGGGCC TGGCCTACAC CGAGGGCATG AACGGCGAGA GCAAGATCGT CGCGACGCCG GCGGCGCCGA CGGTGAAGGA TCTCGACGCC ATCAGCCCGG ACTGGGGCAT CCTCGACTGG ACGCTCTACA AGTACATCCC GATGAACACC CGGGTCGCGA TCCCCAACAT GGCGCGCGGC TGTCCGTTCA CCTGTTCGTT CTGCTCGCAG TGGAAGTTCT GGCGCGACTA TCGCGTCCGC GATCCGAAGA AGGTGGTCGA CGAAATCCAG GAACTGGTCG AAAAATACCA GGTCGGCTTC TTCATCCTCG CCGACGAAGA ACCCACCATC AACCGCAAGA AGTTCATCCA GTTCTGCGAA GAGCTGATCG CCCGCGGCCT GAACAAGAAG GTGCAGTGGG GCATCAACAC CCGCGTCACC GACATCCTGC GCGACGAGCA GCTTCTGAAG TTCTACAACG AAGCCGGCCT GATGCACGTG TCGCTCGGTA CCGAGGCGGC GGCGCAGCTC AAGCTCGACC TGTTCAACAA GGAAACCAAG ATCGCCGACA ACAAGAAGGC GATCCGGCTG CTGCGTGAAG CGGGCATCGT CACCGAGGCG CAGTTCATCG TCGGCCTCGA CTCCGAGACT CCGGAGACGC TGGAAGAAAC CTATCGCATG GCGATGGACT GGAAGCCGGA TCTGGCCAAC TGGTCGATGT ATACGCCCTG GCCGTTCACG CCGCTGTTCA AGGAACTGAG CGACAAGGTC GAAGTGTTCG ACTTCGACAA GTACAATTTC GTCACGCCGA TCGTGAAGCC GGCGGCGATG GAACGCGGCG AACTGCTCGA CCGGGTGATG AACAATTATC GCCGGTTCTA CATGTACAAG GCGTTCTTCT CCTACCCGTG GTCGGGCAGC GGGCGGCGCC GTCGCTATCT GCTGGGCTGC CTCAAGGCGT TCCTGAAGGC CGGCTTCGAA CGCAAATTCT ACGACCTCGG CCGGGTCGGC TATTGGGGTC CGCAGTCGAA GAAGAAGGTC GACTTCCACT TCGACACCAC CCGCAAGATC TCGCACGCGC AGATGGCCGA CTGGGAAGCC AACGCGGATC GTTCGCGCAA GTCGGCAGCC TCCCAGATGG CCATCGTCTC GGCCTGCGGC GGCGGCTCCG AACAGATGTC GGAACCGATC AGTTGCGAAG GCGCCAAGGA GAAATTGGCG GAGACCGTTA CCAGCCGCAT GGTGGACAAC GCCAATGAAG CAGGTTCGCT CACCCGCCAC TGA
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Protein sequence | MCHCFLTIMG EMSVRILLIH PNYHSGGAEI AGNWPPAWAP YLAGALKANG FTDIKFIDAM TEDTSDEQLA KIVADYQPDL VGATSITPSI YKAEEALKVV KQVNPKIVTM LGGVHATFMY QQVLTEAPWV DVIVRGEGEE IVVELARAVA SGNWPANRDA IKGLAYTEGM NGESKIVATP AAPTVKDLDA ISPDWGILDW TLYKYIPMNT RVAIPNMARG CPFTCSFCSQ WKFWRDYRVR DPKKVVDEIQ ELVEKYQVGF FILADEEPTI NRKKFIQFCE ELIARGLNKK VQWGINTRVT DILRDEQLLK FYNEAGLMHV SLGTEAAAQL KLDLFNKETK IADNKKAIRL LREAGIVTEA QFIVGLDSET PETLEETYRM AMDWKPDLAN WSMYTPWPFT PLFKELSDKV EVFDFDKYNF VTPIVKPAAM ERGELLDRVM NNYRRFYMYK AFFSYPWSGS GRRRRYLLGC LKAFLKAGFE RKFYDLGRVG YWGPQSKKKV DFHFDTTRKI SHAQMADWEA NADRSRKSAA SQMAIVSACG GGSEQMSEPI SCEGAKEKLA ETVTSRMVDN ANEAGSLTRH
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