Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3852 |
Symbol | |
ID | 3911656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4404716 |
End bp | 4407355 |
Gene Length | 2640 bp |
Protein Length | 879 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637885753 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_487456 |
Protein GI | 86750960 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0452097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.946176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTTC CCGCCTCGAT CCGCCCCCAG CTCAAACGCT CGAAGATCGC CCTCAGGCTC ACCGCGGTCG CGCTGATCCT GTCGATCTTC GGGACCAATC TGATTTTTCT CGGCAACCTG CGCGAGACCA CGCTGCAGAC CGCGGAAGCC AATCTGCAGC GCTACAATCT CACCCTCTCG GAGGAAGCCG ACCGCTCGTT CAAGTCGCTC GACCTCGTGC TGTCCAGCGT CAGCGACTAT CTCGCTCGGC GCGAAGTCAC CGACGGCCAT TCCTACAAGC GCACGGTGTC CGGTCAGGAC ACCCATATCC TGCTGAAGGA GAAGATCACC GGCCTGCCCC AGATCGACGC CGTGTCGTTG ATCGACGACC AGGGAAAGCT GATCAACTTC TCGCGCTATT GGCCGATCCC CGACGTCGAC GTGTCGGACC GTGATTACTT CAAGGCGCTC AGCAGCGACA CCAATCTCGA GACCTTCATC AGCGCGCCGG TCCGGAACCG CGGCAACGGT ACCTGGACCA TCTACCTCGC ACGCCGCCTC GACGACCCCA ACGGTAAGTT CATGGGGATG CTGTTGGGGG CGATGTCGCA GCGCTACGTC GAGAATTTCT TCGCCGCGAC CGCGCCCGGT CCGGATACCG AGATCGCGCT GGTGCGCGAC GACGACCTGC TGCTGGCGGC ATATCCGCAT TCGGAGGCGA TCGGCCGGTT GAAATCGTCC GGCGGACGCA GCGCCTTGGA GGCCGGCGGC AAGCTCCGCG AGGCCGGCAG CGGAATCGGC AAGCCCCTGA TCCGTTCGGC GCGGATGCTG CCGAACTATC CGGTTCTGGT GACGGTGGCA CAGCACGAGG ACGGCTTGCT GCGCAGCTGG CAGGAGATGG CGACGCTGCT GATCGCCATG TCGGTCGTCA GCGCACTGAT CATCCTCACC GGCAGCATCG CGATCGCCCG CTGGTGGAAC AAGCAGGCCG TCTACACCGA GGCCGCCGAA GCCGCCAGCG CCGCGAAATC GAGCTTCGTG GCGATGATGA GCCACGAGAT CCGCACCCCC ATGAATGCGG TGCTCGGCCT CGCCAACAAC CTGCTCGAGA CCAGGCTCGA CGCCGACCAG CGTCGCGCCG TCGTCGGCAT TCACGACGCC GGCGACAACC TGCTGGAGAT CCTCGACGAC ATTCTCGATT TCTCCAAGCT CGAAGCCGGA CGGCTGTCGC TCGAACTGAT CCCGTTTTCG CCGCACAACA TCGTCGAACA TTCGCTGAGC ATGATCGGCC CGCGCGCGAT CGCCAAGGGG CTCGCGATCG GCACCGACAT CAGCGATGAT CTGCCACGGG CGCTGATCGG CGATCCTGGA CGGATTCGCC AGGTCCTGCT CAATCTGCTT TCCAACGCGG TGAAGTTCAC CTCGTCGGGG AAGATCGTCG TCGCGCTGGA ATGTCTATCG AACGACGGCT CTGCCGCGCG CATTCAATGG ACCGTCAGCG ACACCGGGAT CGGGATCGAC CCCGACAAGA TCGAATCTCT GTTCAGTGAT TTCGTCCAAG CCGACAATTC GATCCGGCGC CGGTTCGGCG GGTCGGGGCT CGGCCTCGCC ATCAGCCGGC GCCTGATCGA ACAGATGGGC GGGCGGATCA ACGTCACCTC GACGCCGGGC CAGGGTTCCG CGTTCCGCTT CACGCTGACG CTGCCGGTCA CGACGGACGT TCCGCCGAAG GAGGAAGACC ACCAGCTTCG CTACGTCGAT CTGAAGGCGC GGATCGCCGC CGGCGGACGG CCATTGCGGC TGCTGATCGT CGACGACAAC CCCACCAACC GCGCGGTCGC CGGCCAGATG CTGAGCGAAT TCGCGATCCA GTGCGACACG GCCTGCGACG GCGCCGAAGC CGTCACGGCG GCGACGCGGT TCAGTTACGA CGCGATCCTG ATGGACATGC GGATGCCGGA GATGGACGGG CTGGAAGCGA CCCGCGCGAT CCGCGCCAAG GGGGGCGCGC TGGCGACGGT TCCGATCATC GCGTTCACCG CGAACGCATT CGCCGAGGAC GAGAAGGCCT GCCGCGAGGC CGGCATGAAC GATCACATCG CCAAACCGGT CCGCAAGAAC GTGCTGGTCG GCGCCATCCT GCGCGCGCTG CCGCCGCTCC CGTCGCCGGG CGCGCGCAGC GTCCGGCCGG CGCCGGAGGC GACCGGAGCC CCGCCGCCCA CCGGCTCGCA GAACGGCACC GCAACGCCGC GGGCTCCGGC GCCGATCGCC CATGCGGTCG ACACCGGCGC CGCCGTCCGC CTCTACGTCG GGAAAACCGC ATTCGATCAT CTGGTCGCCG AAATCGGCGA GCAGTCGAGC CGCGATGTGC TGGCGGTGTT CATCCGGGAC ACCGCGGCGC GGCTCGAATT GCTGGCGGCC CTCGAGATCG GAACCGACCG GCGAAAGATC GAACGCGAAG CGCATTCGCT GAAGAGCGCG GCAGCCACCT TCGGGCTCGA CCGGCTCGCG AGCCTCGCCC GCGAACTCGA GCGCACCGCG CCGCAACTGT CAGAAGCCGG CTACGTCGCG CAGGTCTCGG AGATCAGGGC CGCGTTCGCA GCCGCACAGC GGGCGCCGAT CGGTGACGAT TGTCTGGTCG AATTCGCCGA CCCGGCATGA
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Protein sequence | MTLPASIRPQ LKRSKIALRL TAVALILSIF GTNLIFLGNL RETTLQTAEA NLQRYNLTLS EEADRSFKSL DLVLSSVSDY LARREVTDGH SYKRTVSGQD THILLKEKIT GLPQIDAVSL IDDQGKLINF SRYWPIPDVD VSDRDYFKAL SSDTNLETFI SAPVRNRGNG TWTIYLARRL DDPNGKFMGM LLGAMSQRYV ENFFAATAPG PDTEIALVRD DDLLLAAYPH SEAIGRLKSS GGRSALEAGG KLREAGSGIG KPLIRSARML PNYPVLVTVA QHEDGLLRSW QEMATLLIAM SVVSALIILT GSIAIARWWN KQAVYTEAAE AASAAKSSFV AMMSHEIRTP MNAVLGLANN LLETRLDADQ RRAVVGIHDA GDNLLEILDD ILDFSKLEAG RLSLELIPFS PHNIVEHSLS MIGPRAIAKG LAIGTDISDD LPRALIGDPG RIRQVLLNLL SNAVKFTSSG KIVVALECLS NDGSAARIQW TVSDTGIGID PDKIESLFSD FVQADNSIRR RFGGSGLGLA ISRRLIEQMG GRINVTSTPG QGSAFRFTLT LPVTTDVPPK EEDHQLRYVD LKARIAAGGR PLRLLIVDDN PTNRAVAGQM LSEFAIQCDT ACDGAEAVTA ATRFSYDAIL MDMRMPEMDG LEATRAIRAK GGALATVPII AFTANAFAED EKACREAGMN DHIAKPVRKN VLVGAILRAL PPLPSPGARS VRPAPEATGA PPPTGSQNGT ATPRAPAPIA HAVDTGAAVR LYVGKTAFDH LVAEIGEQSS RDVLAVFIRD TAARLELLAA LEIGTDRRKI EREAHSLKSA AATFGLDRLA SLARELERTA PQLSEAGYVA QVSEIRAAFA AAQRAPIGDD CLVEFADPA
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