Gene RPB_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3843 
Symbol 
ID3911646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4389535 
End bp4389855 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content65% 
IMG OID637885743 
Productferredoxin 
Protein accessionYP_487447 
Protein GI86750951 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.499595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA TTCACTTTGT TGATCACTCC GGAGAGACCC GCATCGTCGA CGTCGAGAAC 
GGCGCGACCG TGATGGAAGC GGCGATCCGC AACGCCATCC CCGGCATCGA GGCCGAATGC
GGCGGCGCCT GCGCCTGCGC GACCTGCCAC GTCTATGTCG ACGAGGCCTG GCGCGAGAAG
GTCGGCGGCC CCTCGCCGAT GGAAGAGGAC ATGCTCGACT TCGGCTACGA CGTGCGCCCG
AACTCGCGGC TGTCGTGCCA GATCAAGGTC TCGGACGAAC TCGACGGCCT GGTGATCTCG
ACCCCGGATC GTCAGGCGTA A
 
Protein sequence
MAKIHFVDHS GETRIVDVEN GATVMEAAIR NAIPGIEAEC GGACACATCH VYVDEAWREK 
VGGPSPMEED MLDFGYDVRP NSRLSCQIKV SDELDGLVIS TPDRQA