| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3806 |
|---|
| Symbol | |
|---|
| ID | 3911609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4343970 |
|---|
| End bp | 4345025 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637885707 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_487411 |
|---|
| Protein GI | 86750915 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.925036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTGA CCTTCCGCGC CGCCGTTCTT CGTGAGCTGA ATCGGCCGCT CGCCATCGAG
ACCGTCGAGG CGCCGCCGCT CGCGGCCGGG CAGGTGCTGG TCAAGCTGGC GTATTCCGGG
GTGTGCCACA GCCAGGTGAT GGAAGCGCGG GGCGGCCGCG GCGTCGATCG CTATCTGCCG
CACATGCTCG GCCACGAGGG CTCGGGCGTC GTGGTCGAGA CCGGCGCCGG CGTGACCAAG
GTGAAGACGG GCGATCGCGT CATCCTCGGC TGGATCAAGG GCAAAGGCGC CGACGCGCAG
GGCATCCGCT ACAAGAGCGG CGACGGCTTC ATCAATGCCG GCGCGGTGAC GACGTTCAAC
GAATACGCCG TGGTCGCGGA GAACCGCGTG ACCCTGCTGC CGCAGGGCCT GCCGATGGAC
GTCGCGGTGC TGTTCGGCTG CGCGCTGCCG GTCGGCGCCG GCATCGTCAT CAATATCGCC
AAGCCCGCGC CCGGCAGCAC GCTCGCGGTG TTCGGGCTCG GCGGCATCGG GTTGTCGGCG
CTGATGGCGT GCAAGCTGTT CGACTGCAGG CAACTGATCG CCGTCGATGT CGAGCCCGCG
AAGCTGGCGA TGGCGCGCGA ACTCGGCGCC ACCGCGACGA TCGATGCGTC GCAGCAGGAT
CCGGTCGCTG CGATCCGGGA GCTGACCGGC GGGCTCGGTG TCGACTACGC CATTGAATCC
GCCGGCCTGG TGCGCGTCAT CGAGCAGGCG TTCGACGCCA CGCGGCGGTT CGGCGGGCTG
TGCGTGTTCG CCTCGCATCC GCGTTCCGGC GAAAAGATCG CGCTCGACCC GTTCGAACTG
ATCTGCGGCA AGCGCATCCT CGGCACCTGG GGTGGCGACG CCAATCCGGA CCGCGACGTC
GACCTGCTCG CCGGCCTGTT CCGCGCCGGC AAGCTGCCGC TGGCCTCGAT GTTCAGCCGC
CGCTACGCGC TCGACGAGAT CAACATCGCC CTCGACGATC TCGAACAGCG CCGCAGCGTG
CGGCCGCTGA TCGAAATCGA TGCGACATTG GGCTGA
|
|---|
| Protein sequence | MPVTFRAAVL RELNRPLAIE TVEAPPLAAG QVLVKLAYSG VCHSQVMEAR GGRGVDRYLP
HMLGHEGSGV VVETGAGVTK VKTGDRVILG WIKGKGADAQ GIRYKSGDGF INAGAVTTFN
EYAVVAENRV TLLPQGLPMD VAVLFGCALP VGAGIVINIA KPAPGSTLAV FGLGGIGLSA
LMACKLFDCR QLIAVDVEPA KLAMARELGA TATIDASQQD PVAAIRELTG GLGVDYAIES
AGLVRVIEQA FDATRRFGGL CVFASHPRSG EKIALDPFEL ICGKRILGTW GGDANPDRDV
DLLAGLFRAG KLPLASMFSR RYALDEINIA LDDLEQRRSV RPLIEIDATL G
|
|---|
| |