Gene RPB_3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3789 
SymbolflgH 
ID3911592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4324434 
End bp4325192 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID637885690 
Productflagellar basal body L-ring protein 
Protein accessionYP_487394 
Protein GI86750898 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0885051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGT CAGTATCGAC CAACCGCATC GTCCTGATCA CCGCGCTGCT CGCGACGGGA 
GGGCTCGCCG GCGGCTGCTC CTCGATCGAC CGCCTCGCCG CGATCGGTGA GAAACCGGCG
CTGAGCGCGA TCGAAAATCC GACCACGCAG CCCGGCTACA AGCCGGTGCA GATGCCGATG
CCGAAGCCCG AGGTGGCGTC CTACAATGCC AACTCGCTGT GGCGGAACGG CTCGCGCGCG
TTCTTCCGCG ATCAGCGCGC CGCCAAGGTC GGCGACATCA TGACGGTGAC GGTGAACTTC
ACCGACAAGG CCGCGATCGC CAACGAGACC AAGCGCAGCC GGAGTGGCAG CGAAGATTCC
GGCATCACCG ACTTCGCCGG CAGCAAGCTG CTAACCGGCG ACGCCGCGCA GGTTCTGCCG
GGCCGGATCT TGACAACCGA CTCATCGTCA TCCAGCGGCG GCAAGGGCAC CGTCGACCGT
CAGGAAAAAC TGCAGACCAG CGTCGCCGCG GTGGTGACGC AGGTGCTGCC GAACGGCAAT
CTGGTGGTCG AGGGCAAGCA GGAAATCCGC GTCAATTTCG AAGTCCGCGA ACTGATCGTC
GCCGGCATCG TCCGCCCGGA AGACATTCAG AGCGACAACA CCATCGACTC CAGCAAGATC
GCGCAGGCCC GCATCGCCTA TGGCGGCCGC GGCCAGATCA CCGACGTGCA GCAGCCGCGC
TACGGCCAGC AGGTGATGGA CGTGCTGCTG CCGTTCTGA
 
Protein sequence
MFKSVSTNRI VLITALLATG GLAGGCSSID RLAAIGEKPA LSAIENPTTQ PGYKPVQMPM 
PKPEVASYNA NSLWRNGSRA FFRDQRAAKV GDIMTVTVNF TDKAAIANET KRSRSGSEDS
GITDFAGSKL LTGDAAQVLP GRILTTDSSS SSGGKGTVDR QEKLQTSVAA VVTQVLPNGN
LVVEGKQEIR VNFEVRELIV AGIVRPEDIQ SDNTIDSSKI AQARIAYGGR GQITDVQQPR
YGQQVMDVLL PF