Gene RPB_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3782 
Symbol 
ID3911585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4318491 
End bp4319270 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID637885683 
Producthypothetical protein 
Protein accessionYP_487387 
Protein GI86750891 
COG category[S] Function unknown 
COG ID[COG3334] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT TTCGAGACAT CCGCATCCTT CCGGTGGTTC TGGTCGCGAT CCTCGGCCTC 
GCAGTGCTGA AGATCGCCGG CCTGCTGCTG GATGGCGGCT ATGTGTTCGA TTACGATCCG
AAAGCGACCA AGCCGTCATG GGCGCAGTCC AACTTCAACT TCCCGGGCGG CAATACCAAA
CCGGTGGATT CCGAACTCGC GTCCGACATC ACTGGCTCGG TGCCGGCGCC GCCGAAGAAG
GAAGAGCCGG CGGTGGCCGC GCCGGCGGAG GTCAAGCTCG TCGAGCCGCC GGTCGAACAG
CCGCCGGGCA TTTCTCCGTC CGAGCGTGCG ATCCTGGAGC GGCTGCAGGC GCGTCGGCAG
GAGCTCGATG CGCGGGCGCG CGAAGTCGAG ATCCGCGAGA GCCTGCTCAA GGCCGCGGAG
AAGCGGATCG AGTCCCGCGT CGAGGAGATG AAGGCGACCG AGGGCCAGAT CGGCAAGGCG
ACCGAACAGA AATCCGAGGC CGACGTCGCG CGCTTCAAGG GCATCATCAC GATGTACGAG
GCGATGAAGC CGAAGGACGC CGCCAAGATC TTCGACCGGC TGGAAATGCC GGTGCTGATC
GAGATCGCGT CGCAGATCGC GCCACGCAAG ATGTCCGACA TCATGGGGCT GATGACTCCG
GAGGCCGCCG AGAAGCTGAC CGTCGAACTG GCGCGCCGCG CCACCGGCAA GAGCGCGGCC
ACTGCGTCGG CCGCGGCACT GCCGAAGATC GAGGGCCGGC CGATACCGGC CCGGCCATAG
 
Protein sequence
MNAFRDIRIL PVVLVAILGL AVLKIAGLLL DGGYVFDYDP KATKPSWAQS NFNFPGGNTK 
PVDSELASDI TGSVPAPPKK EEPAVAAPAE VKLVEPPVEQ PPGISPSERA ILERLQARRQ
ELDARAREVE IRESLLKAAE KRIESRVEEM KATEGQIGKA TEQKSEADVA RFKGIITMYE
AMKPKDAAKI FDRLEMPVLI EIASQIAPRK MSDIMGLMTP EAAEKLTVEL ARRATGKSAA
TASAAALPKI EGRPIPARP