Gene RPB_3772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3772 
SymbolflhB 
ID3911575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4308181 
End bp4309257 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content65% 
IMG OID637885673 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_487377 
Protein GI86750881 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0655991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACG ACAGCGACCA GGAGAAACAA GAGGAGCCGA CACAGAAACG CCTCGACGAC 
GCGCTCGAGA AAGGCGACGT CGCCAAGAGT CAGGAGGTCA ACACCTGGTT CGCGATCGCC
GGCGCCACCC TGCTGCTGTC GTCGTTTTCG GGGTCGATCG GCTCCGGCAT CACCGGGCCG
ATGCGGACGC TGATCGAGAA ATCGTGGATG CTGCCGGTCG ACGGCGTGGG CCTGCTGGCG
CTGACCAAGA GTCTGCTGCT GATGCTGATC TCGGTTCTCG GCGTTCCGCT GGGGCTGCTG
GCGCTGGTCG CGATCGGAAG CAATCTGATC CAGCATCGGC TGGTGTTCTC CACCGAGGGG
CTGAAGCCGA AATTCAGCAA GCTGTCGCCG CTCGAGGGCG CCAAGCGGCT GTTCGGCAAG
CAGGCGCTGG CGAATTTCCT CAAGGGCCTG TTCAAGGTGA TCGCGCTCGG CGTGGTGATG
GTCGCGGTGC TGTATCCGGA GCGCGACCGG CTCGACGCGC TGCTGCAAAT GGACGTCGTG
TCGTTGCTCG GCGTCACGGT GTCGCTGACG CTGAAACTGA TGGGCACGGT GGCGGCGGTG
CTCGCCTTCG TCGCCGCCGG CGATTTCTTC TTCCAGTATC ACACCTGGCG CGAGCGGCAG
AAGATGTCGC TGCAGGAGGT CAAGGACGAA TACAAGCAGT CGGAAGGCGA CCCGCACATC
AAGGGCCGCA TCCGGCAGAT CCGCTATCAG CGGATGAAGA AGCGGATGAT GGCGGCGGTG
CCGGGCGCCT CCGTGGTCAT CACCAACCCG ACCCACTTCT CGGTGGCGCT GAAATACGAG
CGCGGCATGC AGGCGCCGAT CTGCGTCGCC AAGGGCGCCG ACGCGATCGC GTTCAAGATC
AGGGAAGTGG CGAAGGCGAA CGACGTGCCG ATCGTCGAAA ACGTTCCCCT GGCGCGCGCG
CTGTTCGCCA CCGTCGAGGT CGACGAGGAG ATTCCGGTCG AACACTACCA CGCCGTCGCC
GAGGTGATCG GCTATGTCAT GAACCTGCGG CGACGCTTCG GCGGACGGCG GACCTAG
 
Protein sequence
MSDDSDQEKQ EEPTQKRLDD ALEKGDVAKS QEVNTWFAIA GATLLLSSFS GSIGSGITGP 
MRTLIEKSWM LPVDGVGLLA LTKSLLLMLI SVLGVPLGLL ALVAIGSNLI QHRLVFSTEG
LKPKFSKLSP LEGAKRLFGK QALANFLKGL FKVIALGVVM VAVLYPERDR LDALLQMDVV
SLLGVTVSLT LKLMGTVAAV LAFVAAGDFF FQYHTWRERQ KMSLQEVKDE YKQSEGDPHI
KGRIRQIRYQ RMKKRMMAAV PGASVVITNP THFSVALKYE RGMQAPICVA KGADAIAFKI
REVAKANDVP IVENVPLARA LFATVEVDEE IPVEHYHAVA EVIGYVMNLR RRFGGRRT