| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3762 |
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| Symbol | |
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| ID | 3911565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4296785 |
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| End bp | 4298452 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885663 |
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| Product | fumarate hydratase, class I |
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| Protein accession | YP_487367 |
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| Protein GI | 86750871 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC CCACGCCGAT CCCGTCCGCC GCCACGCCGG TTCCGCCCTA CACCCACACG
CCGCTGTTTC CGCTCGGCAA GGACGAGACG CCGTATCGCA AGATCACGTC GGAGGGGGTG
CGTGTCGAGA CGGTGCTGGG CCGGGACATG CTGGTGGTCG AGCGCGAGGC GCTGCGGGCG
CTGTCGGAGG CGGCGTTCGG CGACATCAAC CATTATCTGC GGCCGGGCCA TCTCGCCCAG
CTGCGCAAGA TCCTCGACGA TCCGGAGGCC AGCCCGAACG ACAAGTTCGT GGCGCTGGAC
TTCCTGAAGA ACGCCAACAT CGCCGCCGGC GGCGTGCTGC CGATGTGCCA GGACACCGGC
ACCGCGATCA TCATGGGCAA GAAGGGCTGC AACGTCATCA CCGACGGCAG CGACGAGGCG
GCGCTCTCCG AGGGCGCGCG CGATGCCTAT CTGCGCCGCA ATCTGCGCTA CTCGCAGGTG
GCGCCGCTGA CGATGTACGA AGAGAAGAAC ACCGCCAACA ACATGCCGGC GCAGTGCGAG
ATCTACGCGG AAGGCCAAGG GGACTCAGCA GCCGCCTACA AGTTCATGTT CATGGCCAAG
GGCGGCGGCT CGGCCAACAA GAGCTTCCTG TTCCAGGCGA CGCCGTCGGT GCTGACCCGC
GACCGGCTGC TGGCGTTCCT GAAAGAGAAG ATCATGACGC TCGGCACCGC GGCGTGCCCG
CCCTATCATC TGGCGATCGT GATCGGCGGC ACCTCGGTCG AGTCGACCAT GAAGACGGTG
AAGCTCGCAT CCGCGCGCTA TCTCGACGCG CTGCCGACGC AAGGCTCCGA ATTCGGCAAC
GCCTTCCGCG ATCTCGAGAT GGAGCAGGAA ATCCTGAAGA TGACGCAGAG CCTCGGCGTC
GGCGCGCAGT TCGGCGGCAA GTATTTCTGC CACGACGTCC GAGTCATCCG GCTGCCGCGC
CACGGCGCGT CGTTGCCGAT CGGGCTCGGC GTGTCGTGCT CGGCGGATCG CCAGGTGCTC
GGCAAGATCA CCAAGGACGG CGTCTATCTC GAGGAGCTCG AGCACCATCC GGCGCAATAT
CTGCCGGAGG TCGAGCAGGC GCTCGGCGGC GAGGTGGTGC AGATCGATCT GAACCAGCCG
ATGCAGGACA TTCTCGCCAC GCTGAGCGAA CACCCGATCA AGACCCGGCT GTCGCTGACC
GGCACCATGA TCGTGGCGCG CGACGCCGCC CATGCGAAAT TGCGCGAACG CCTCGACAAG
GGCGAGCCGT TGCCGGACTA TTTCAAGAAC CATCCGGTGT ACTACGCCGG CCCCGCCAAG
ACGCCCGACG GCTACGCCTC CGGCGCGTTC GGCCCGACCA CGGCGGGGCG GATGGACTCG
TTCGTCGATC AGTTCCAGGC CGCCGGCGGC TCGATGGTGA TGGTCGCCAA GGGCAACCGC
GCGCCCGCGG TGCGCGAGGC CTGCAAGAAA TACGGCGGCT TCTATCTCGG CTCGATCGGC
GGCGCCGCGG CGAACCTCGC CGAGCACTGC ATCAAGAAGG TCGAGGTGCT GGAATATCCC
GAGCTCGGCA TGGAGGCGAT CTGGAAGATC GACGTCGTCG ACTTCCCGGC CTTCATCATC
GTCGACGACA AGGGCAACGA CTTCTTCAAG GAACTCAATC TGGGCTGA
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| Protein sequence | MNAPTPIPSA ATPVPPYTHT PLFPLGKDET PYRKITSEGV RVETVLGRDM LVVEREALRA
LSEAAFGDIN HYLRPGHLAQ LRKILDDPEA SPNDKFVALD FLKNANIAAG GVLPMCQDTG
TAIIMGKKGC NVITDGSDEA ALSEGARDAY LRRNLRYSQV APLTMYEEKN TANNMPAQCE
IYAEGQGDSA AAYKFMFMAK GGGSANKSFL FQATPSVLTR DRLLAFLKEK IMTLGTAACP
PYHLAIVIGG TSVESTMKTV KLASARYLDA LPTQGSEFGN AFRDLEMEQE ILKMTQSLGV
GAQFGGKYFC HDVRVIRLPR HGASLPIGLG VSCSADRQVL GKITKDGVYL EELEHHPAQY
LPEVEQALGG EVVQIDLNQP MQDILATLSE HPIKTRLSLT GTMIVARDAA HAKLRERLDK
GEPLPDYFKN HPVYYAGPAK TPDGYASGAF GPTTAGRMDS FVDQFQAAGG SMVMVAKGNR
APAVREACKK YGGFYLGSIG GAAANLAEHC IKKVEVLEYP ELGMEAIWKI DVVDFPAFII
VDDKGNDFFK ELNLG
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