Gene RPB_3759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3759 
Symbol 
ID3911562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4294448 
End bp4295200 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content59% 
IMG OID637885660 
Productnuclear protein SET 
Protein accessionYP_487364 
Protein GI86750868 
COG category[R] General function prediction only 
COG ID[COG2940] Proteins containing SET domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.349048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGTGGA ATCGCTCTAG AAGACAGCCT CGCGATCCGT TCACCGCCTG GAAGATCATG 
CCCGCTTTGT CGAACAAGCC CTACCGCATC GGCCGCTCCA AAACCGGGCT CGGCCTGTTC
GCCACCCAGC CGATCAAGAA GGGCACCAAG ATCATCCGTT ATTTCGGGCC GATGCTCGAC
TGCAACAAGA AGAAGGACGA CGCGGTCGAG AACAAATATC TGTTCCAGAT CAGCAAGCGC
TGGACCGTCG ACGGCTCGGT GCGCAAGAAC ATCGCGCGCT ACATCAACCA CGCCTGCAAT
CCGAACGCGG AGTCGGATGT GAACGTGCGC AAGCGCAAGA TCATCATCCG CGCGATCAAG
AACATCGAGC CCGGCGACGA GATCAACTAC GACTACGGCA CCGATTACTT CAAAGAATAT
CTGAAGCCGA TCGGCTGCAA ATGCGAATCC TGCGAAAAGA AGCGCAAGAA GAAGGCCGCC
GAAGCCCGCG CCGAGAAGGC GAAGCTGAAA GAGAAGGCCG CGCGCAAGGC GCAGAAGCAG
GCCGACAGGG ACGCTGGCAA GGCGAAGGCC GGCGGAAAGG CGAAGCCCGA GAAGGCCGTC
AAGGCGAAGA CGCCGAAGGG CAAATCTGCG AAGGCCAAGA CTTCCAAGTC CGCGGCGTCC
AAGTCCGATG CGTCCAAGTC CGCGGCGTCC AAGCCCAAGG CTTCGAAGAC GTCGACGTCC
AAGATGTCGA AGTCCAAATC GAAAGCCGCC TAG
 
Protein sequence
MPWNRSRRQP RDPFTAWKIM PALSNKPYRI GRSKTGLGLF ATQPIKKGTK IIRYFGPMLD 
CNKKKDDAVE NKYLFQISKR WTVDGSVRKN IARYINHACN PNAESDVNVR KRKIIIRAIK
NIEPGDEINY DYGTDYFKEY LKPIGCKCES CEKKRKKKAA EARAEKAKLK EKAARKAQKQ
ADRDAGKAKA GGKAKPEKAV KAKTPKGKSA KAKTSKSAAS KSDASKSAAS KPKASKTSTS
KMSKSKSKAA