Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3759 |
Symbol | |
ID | 3911562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4294448 |
End bp | 4295200 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637885660 |
Product | nuclear protein SET |
Protein accession | YP_487364 |
Protein GI | 86750868 |
COG category | [R] General function prediction only |
COG ID | [COG2940] Proteins containing SET domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.349048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGTGGA ATCGCTCTAG AAGACAGCCT CGCGATCCGT TCACCGCCTG GAAGATCATG CCCGCTTTGT CGAACAAGCC CTACCGCATC GGCCGCTCCA AAACCGGGCT CGGCCTGTTC GCCACCCAGC CGATCAAGAA GGGCACCAAG ATCATCCGTT ATTTCGGGCC GATGCTCGAC TGCAACAAGA AGAAGGACGA CGCGGTCGAG AACAAATATC TGTTCCAGAT CAGCAAGCGC TGGACCGTCG ACGGCTCGGT GCGCAAGAAC ATCGCGCGCT ACATCAACCA CGCCTGCAAT CCGAACGCGG AGTCGGATGT GAACGTGCGC AAGCGCAAGA TCATCATCCG CGCGATCAAG AACATCGAGC CCGGCGACGA GATCAACTAC GACTACGGCA CCGATTACTT CAAAGAATAT CTGAAGCCGA TCGGCTGCAA ATGCGAATCC TGCGAAAAGA AGCGCAAGAA GAAGGCCGCC GAAGCCCGCG CCGAGAAGGC GAAGCTGAAA GAGAAGGCCG CGCGCAAGGC GCAGAAGCAG GCCGACAGGG ACGCTGGCAA GGCGAAGGCC GGCGGAAAGG CGAAGCCCGA GAAGGCCGTC AAGGCGAAGA CGCCGAAGGG CAAATCTGCG AAGGCCAAGA CTTCCAAGTC CGCGGCGTCC AAGTCCGATG CGTCCAAGTC CGCGGCGTCC AAGCCCAAGG CTTCGAAGAC GTCGACGTCC AAGATGTCGA AGTCCAAATC GAAAGCCGCC TAG
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Protein sequence | MPWNRSRRQP RDPFTAWKIM PALSNKPYRI GRSKTGLGLF ATQPIKKGTK IIRYFGPMLD CNKKKDDAVE NKYLFQISKR WTVDGSVRKN IARYINHACN PNAESDVNVR KRKIIIRAIK NIEPGDEINY DYGTDYFKEY LKPIGCKCES CEKKRKKKAA EARAEKAKLK EKAARKAQKQ ADRDAGKAKA GGKAKPEKAV KAKTPKGKSA KAKTSKSAAS KSDASKSAAS KPKASKTSTS KMSKSKSKAA
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