| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3757 |
|---|
| Symbol | |
|---|
| ID | 3911560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4292889 |
|---|
| End bp | 4293710 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637885658 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_487362 |
|---|
| Protein GI | 86750866 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.559564 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAA CCGTCTCGTC AGCCAAAGCG GCCGCCGGCG CGCAGCCGGT CCGCATCGGT
GATTACTTGC GGCAATGGCG CCAGCGCCGT CATCTGAGCC AGCTCGATCT CGCGCTCGAT
GCGGAGATTT CCGCGCGGCA TCTGTCGTTC GTCGAGACCG GCCGCGCCGC GCCGTCGCGC
GACATGGTGA TGCGGCTGGC GGAGCGGCTC GACGTGCCGC TACGCGAACG GAACGTGCTG
CTGGTGGCGG CGGGCTTCGC GCCGGCGTTC CCGCAACGGA CGCTCGACGA TCCGGCGCTG
CATGCGGCGC GTGCCGCGGT CGATCAGGTG CTGACCGCGC ACGAGCCGAA TCCTGCGCTT
GCGGTCGACC GGCACTGGAA CCTGGTGTCG GCCAATCGCA TGGTGATGCC GCTGCTGGAC
GGCATCGCGC CGGATCTGCT GGCGCCGCCG CTCAACGTGC TGCGGCTGTC GTTTCATCCG
GAGGGGCTGG CGGCGCGCAC CGCCAATCTC GGCGAATGGT GCGCGCATCT GCTGGAGCGG
CTGCATCGGC AATGCGAGGC GACCGCCGAT CCGAAGCTGA TCGCGCTGTA TCAGGAACTG
AAGACCTATC CGGTGCCGGC CCGCGCCGCG CCGATCGCGC CCGATGCGGT GGCGGTGCCG
TTCAGGCTTA GGCTCGGCGG CGAGGTGCTG AGTTTCATCT CGACCACGAT GGTGTTCGGC
ACGCCGGTCG ACGTCACGCT CTCGGAAATC GCGATCGAGA CCTTCTTCGC GGCCGACGAA
GCCACGTCGG CACGGCTGCG CAGCATGGCG GCCGGGCTGT AG
|
|---|
| Protein sequence | MNTTVSSAKA AAGAQPVRIG DYLRQWRQRR HLSQLDLALD AEISARHLSF VETGRAAPSR
DMVMRLAERL DVPLRERNVL LVAAGFAPAF PQRTLDDPAL HAARAAVDQV LTAHEPNPAL
AVDRHWNLVS ANRMVMPLLD GIAPDLLAPP LNVLRLSFHP EGLAARTANL GEWCAHLLER
LHRQCEATAD PKLIALYQEL KTYPVPARAA PIAPDAVAVP FRLRLGGEVL SFISTTMVFG
TPVDVTLSEI AIETFFAADE ATSARLRSMA AGL
|
|---|
| |