| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3754 |
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| Symbol | |
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| ID | 3911557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4289225 |
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| End bp | 4290661 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885655 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_487359 |
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| Protein GI | 86750863 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.629066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGTG CGATGCTGTG GAACGCGGCG GTAGCTGCAA CGATGATGCT GGGGGCGGAG
GCTGCGCTGG CGGAAAGCCG CGTCGCCCTG GTGGTCGGCC AGTCGGCCTA CCGCGCCGTG
CCGGCGCTGC CCAATCCGGT CAATGACGCC AAGGCGATCG AGAAGCTGCT CGGCGATGCC
GGCTTCGAGG TCACGGCCGC GAACGATCTG ACCCAGACCG AGTTGCGCCA GATGGTCGGC
GATTTCGCCG CCAAAGTCGC AGCCAAGGGG CCGGACACCG TCGCGCTGAT GTTCTACGCG
GGCCACGGCA TCCAGGTCGA CGGCGAGAAC TATCTCATCC CCATCGACGT CGATCCCAAG
CGCGAGGCTG ATATTCCGCT GCAGGCGGTG CGGCTCAACG ACGTGCTCAA CACCCTGACC
TCGGTGCCGA CCCGCAGCCG CATCATCATG CTCGATGCCT GCCGCAACAA TCCGTTCCCC
GAGATCCGGA AGACCACCGG GCAGGGGCTG GCGCTGGTCG ACGCCAAGAC CGGCGCGCCG
GGCACCTTCC TGTCGTTCTC GACTGCGCCG GGCACCGAGG CCGAAGACGG CGGCGGCGCC
AACAGCCCCT ATACCGCGGC GCTGCTCAAG GCGGGCCGCG AGAGCGGGCT GCAGATCGAG
GATACGTTCA AGCGGGTGCG GCTGGCGGTC AATCAGGCCA CCTCCGGCCG GCAGACGCCG
TGGGAGAGCT CTTCGCTGTT GGATGATTTC CGCTTCTTCG GCAGTGCCGA GGACGGCCTC
AAGCCGGAGA AGAAGCGCAG CGTCGAGGAA TGGAAGGCCT TCCTCAAGGG CAAGCCGATC
GAGCAGGCCA ACGAGTTGAT CGTCTCAGAC GGCTCCGGCG ACGCCTATGA GGCGTTCGTG
TCGCTGTATG CCGAGCCGCC GCTCGGTCCC GAGGCGAAGC GCTGGCTCGA CCGCTTTCGC
CAGATGCAGG CCTGGAACCG GGCGGTGCTC GCCAACAGCG GGCCGGCCTA CCGGTCCTTC
CTCGACCAGT ATCCCGACAG CGACCTGACC CCGACCGCGA AGAAACTGGA AGAACGCCAG
CGCAACAAGC CGGTGCCCGC GGTGGCGATC CCGGCTGCGA CGCAAGCCAG CCTGACCCCG
GTGGCGCCTG CGTCCGCGGC GACCTGTCCG TGCAGCACGC CGCCCGCGAT CCAGAAGAAG
GTCGACAAGC CCAAGCGCGT CGAGCGCGCG GAGCCGCCGA AACGGACCGC CCAGCCGCCG
CGCGGCCGAG TCTACTATGA GGATGACGAC GTCGTCGTGG TGCGCCGCCC GCCGGTCTAT
TACGACCCGC CGCGCGGCCC GAGCATTTCG ATCGGCGGTG GCATCCGGGG CGGCGGCTAT
GGCGGCGGCC CGAGCCGAGG CGGCGACGGC GGCCGCGTCG GCGGCAGCCG CTACTGA
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| Protein sequence | MLRAMLWNAA VAATMMLGAE AALAESRVAL VVGQSAYRAV PALPNPVNDA KAIEKLLGDA
GFEVTAANDL TQTELRQMVG DFAAKVAAKG PDTVALMFYA GHGIQVDGEN YLIPIDVDPK
READIPLQAV RLNDVLNTLT SVPTRSRIIM LDACRNNPFP EIRKTTGQGL ALVDAKTGAP
GTFLSFSTAP GTEAEDGGGA NSPYTAALLK AGRESGLQIE DTFKRVRLAV NQATSGRQTP
WESSSLLDDF RFFGSAEDGL KPEKKRSVEE WKAFLKGKPI EQANELIVSD GSGDAYEAFV
SLYAEPPLGP EAKRWLDRFR QMQAWNRAVL ANSGPAYRSF LDQYPDSDLT PTAKKLEERQ
RNKPVPAVAI PAATQASLTP VAPASAATCP CSTPPAIQKK VDKPKRVERA EPPKRTAQPP
RGRVYYEDDD VVVVRRPPVY YDPPRGPSIS IGGGIRGGGY GGGPSRGGDG GRVGGSRY
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