Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3737 |
Symbol | alaS |
ID | 3911539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4273563 |
End bp | 4276238 |
Gene Length | 2676 bp |
Protein Length | 891 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885638 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_487342 |
Protein GI | 86750846 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0179762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.845616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG TTAACGATAT CAGGTCTGCG TTTCTGAACT ACTTTGCGAA AAATGGTCAC GATATCGTGC CGTCGTCGCC GCTGGTGCCG CGCAACGACC CGACATTGAT GTTCACCAAT GCGGGCATGG TGCAGTTCAA GAACGTCTTC ACCGGGCTCG AGAAGCGGCC GTATCAGCGC GCCACCACCT CGCAGAAATG CGTGCGCGCC GGCGGCAAGC ACAACGACCT CGACAATGTC GGCTACACCG CGCGGCATCT CACCTTCTTC GAGATGCTCG GCAATTTCTC GTTCGGCGAT TACTTCAAGG AACGCGCGAT CGAGCTGGCC TGGAACCTGA TCACCAAGGA ATACGGCCTC AAGAAGGACA AGCTGCTGGT CACCGTCTAT CACACCGACG ACGAGGCCGC CTCCTACTGG AAGAAGATCG CCGGCTTCTC CGACGACCGC ATCATCCGGA TTCCGACCTC GGACAATTTC TGGGCGATGG GCGACACCGG CCCGTGCGGC CCGTGCTCGG AGATCTTCAT CGATCAGGGC GAGCACATTT TCGGCGGTCC GCCCGGCAGC CCGGAGGAGG ACGGCGACCG CTTCCTCGAA TTCTGGAATC TCGTCTTCAT GCAATACGAG CAGGTGACGA AGGACGAGCG CCTGCCGCTG CCGCGCCCGT CGATCGACAC CGGCATGGGG CTGGAGCGGA TGGCGAACAT CCTGCAGGGC GTCGACAGCG TGTTCGAGAC CGACCTGTTC CGTAGCCTGA TCGACGCGAC CTCCTCGGCG CTCGGCCGCG GGCCGGGCGA GGAGGACGCA GCCTCGTTCC GCGTCATCGC CGACCATCTG CGCTCGTCGT CGTTCCTGAT CGCCGATGGC GTGCTGCCGT CGAACGAAGG CCGCGGCTAC GTGCTGCGCC GGATCATGCG CCGCGCGATG CGCCATGCGC AGCTGCTCGG CGCCAGCGAG CCGCTGATGT GGCGGCTGGT GTGGGCGCTG GTGCGCGAGA TGGGCCAGGC CTATCCCGAG CTGGTGCGCG CCGAGGCGAT GATCGAGGAA ACGATGCGCC TGGAAGAGAC CCGCTTCCGC AAGACGCTCG ATCGCGGCCT CGCGATCCTC GACGAGAAGA GCGCGTCGCT GAAGAAGGGC GACATGTTCG ACGGCGACAC CGCCTTCACG CTGTACGACA CCTACGGCTT CCCGCTCGAC CTGACGCAGG ATGCGCTGCG CAACCGCGGC ATCAGCGTCG ACATCGCGTC GTTCACCGAC GCGATGGATC GCCAGCGCGC CAAGGCGCGG GCGTCGTGGG CCGGCAGCGG CGAGGCCGCG ACCGAGACGG TCTGGTTCGG CCTGCGTGAG AAGCTCGGCG CCACGGAGTT CCTGGGCTAC GATACCGAGA CCGCCGAAGG CGTGGTCACT GCGCTGGTCG CGGATGGCAA GGAAGTCGAC GCGCTGAAGG CCGGCGACAG CGGCGCGATC GTGCTGAACC AGACGCCGTT CTATGCCGAG TCCGGCGGGC AGGTGGGCGA CACCGGCGTG CTGTCGGGCG ACGGCGTACG CTTCCGCGTC ACCGATACGC TCAAGAAGGC CGGCGATCTG TTCGTGCATT TCGGCACTGT CGAAGAAGGT GCCATCAAGC GCGACGCCGC GTTGCAGCTC GACGTCGATC ACGCGCGCCG CTCGTCGATC CGCGCCAATC ACTCGGCGAC GCATCTGCTG CACGAGGCGC TGCGCCAGGT GCTCGGCGAT CACATCGCCC AGAAGGGCTC GATGGTGGCG CCCGACCGGC TGCGGTTCGA CTTCGTGCAT CAGAAGCCGA TCACGCCGGA CGAACTGCGT CGCGTCGAGG ACATCGCCAA CGACATCGTG CTCGAGAACG ACGAAGTCAC CACCCGGCTG ATGGCGGTCG ACGACGCCCG CGAGGCCGGC GCCCGCGCGC TGTTCGGCGA GAAATACGGC GACGAGGTCC GCGTGGTGTC GATGGGCAAG ACGGCGCGCG ACAGCGGCAG CAACGCGCTC GGCTGGTCGG TCGAACTCTG CGGCGGCACC CACGTCAAGC GCACCGGCGA CATCGGCCTG GTGTCGATCA CCGGCGAGAG CGCGGTCGCC TCCGGCGTGC GCCGGATCGA GGCGCTGACC GGCCGCTACG CGCGGCAGAG CGCCAATGCG GCGATCAATA CCGCCAAACA GGCCGCCGCC GAACTACGCA CCACCGTCGA CGACATGCCG GCGCGGATCG CGGCCTTGAT GGAGGAGCGC AAAAAGCTCG AGCGCGAACT CTCCGACGCC CGCAAGAAGC TGGCGATGGG CGGGGGCGGT GCGGCCGGCG CGGCCGATGG CGGCGCGGAT GTCCGCGAGG TCGGCGGCGT CAAGCTGATG GCGCGCGCGG TCGAAGGTAT CGAGATCAAG GATCTCAAGA GCCTGGTCGA TCAGGGTAAA AAGCAGCTCG GCTCCGGCGT GATCGCGCTG GTGGCGACCA GCGAGGATGG CAAGGGCTCG ATCGTGGTCG GCGTCACGCC CGATCTGGTG GCGCGGTTCT CCGCGGTGGA CCTTGTGCGC ACGGCGTCCG TAGTGCTCGG CGGCAAAGGC GGCGGCGGCA AGCCCGACAT GGCGCAGGCC GGCGGCCCCG ACGGCTCCAA GGCGCAGGCC GCGCTCGACG CCATCGCCGC GGCGATCGGC GGCTAG
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Protein sequence | MSGVNDIRSA FLNYFAKNGH DIVPSSPLVP RNDPTLMFTN AGMVQFKNVF TGLEKRPYQR ATTSQKCVRA GGKHNDLDNV GYTARHLTFF EMLGNFSFGD YFKERAIELA WNLITKEYGL KKDKLLVTVY HTDDEAASYW KKIAGFSDDR IIRIPTSDNF WAMGDTGPCG PCSEIFIDQG EHIFGGPPGS PEEDGDRFLE FWNLVFMQYE QVTKDERLPL PRPSIDTGMG LERMANILQG VDSVFETDLF RSLIDATSSA LGRGPGEEDA ASFRVIADHL RSSSFLIADG VLPSNEGRGY VLRRIMRRAM RHAQLLGASE PLMWRLVWAL VREMGQAYPE LVRAEAMIEE TMRLEETRFR KTLDRGLAIL DEKSASLKKG DMFDGDTAFT LYDTYGFPLD LTQDALRNRG ISVDIASFTD AMDRQRAKAR ASWAGSGEAA TETVWFGLRE KLGATEFLGY DTETAEGVVT ALVADGKEVD ALKAGDSGAI VLNQTPFYAE SGGQVGDTGV LSGDGVRFRV TDTLKKAGDL FVHFGTVEEG AIKRDAALQL DVDHARRSSI RANHSATHLL HEALRQVLGD HIAQKGSMVA PDRLRFDFVH QKPITPDELR RVEDIANDIV LENDEVTTRL MAVDDAREAG ARALFGEKYG DEVRVVSMGK TARDSGSNAL GWSVELCGGT HVKRTGDIGL VSITGESAVA SGVRRIEALT GRYARQSANA AINTAKQAAA ELRTTVDDMP ARIAALMEER KKLERELSDA RKKLAMGGGG AAGAADGGAD VREVGGVKLM ARAVEGIEIK DLKSLVDQGK KQLGSGVIAL VATSEDGKGS IVVGVTPDLV ARFSAVDLVR TASVVLGGKG GGGKPDMAQA GGPDGSKAQA ALDAIAAAIG G
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