| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3737 |
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| Symbol | alaS |
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| ID | 3911539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4273563 |
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| End bp | 4276238 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885638 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_487342 |
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| Protein GI | 86750846 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0179762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.845616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG TTAACGATAT CAGGTCTGCG TTTCTGAACT ACTTTGCGAA AAATGGTCAC
GATATCGTGC CGTCGTCGCC GCTGGTGCCG CGCAACGACC CGACATTGAT GTTCACCAAT
GCGGGCATGG TGCAGTTCAA GAACGTCTTC ACCGGGCTCG AGAAGCGGCC GTATCAGCGC
GCCACCACCT CGCAGAAATG CGTGCGCGCC GGCGGCAAGC ACAACGACCT CGACAATGTC
GGCTACACCG CGCGGCATCT CACCTTCTTC GAGATGCTCG GCAATTTCTC GTTCGGCGAT
TACTTCAAGG AACGCGCGAT CGAGCTGGCC TGGAACCTGA TCACCAAGGA ATACGGCCTC
AAGAAGGACA AGCTGCTGGT CACCGTCTAT CACACCGACG ACGAGGCCGC CTCCTACTGG
AAGAAGATCG CCGGCTTCTC CGACGACCGC ATCATCCGGA TTCCGACCTC GGACAATTTC
TGGGCGATGG GCGACACCGG CCCGTGCGGC CCGTGCTCGG AGATCTTCAT CGATCAGGGC
GAGCACATTT TCGGCGGTCC GCCCGGCAGC CCGGAGGAGG ACGGCGACCG CTTCCTCGAA
TTCTGGAATC TCGTCTTCAT GCAATACGAG CAGGTGACGA AGGACGAGCG CCTGCCGCTG
CCGCGCCCGT CGATCGACAC CGGCATGGGG CTGGAGCGGA TGGCGAACAT CCTGCAGGGC
GTCGACAGCG TGTTCGAGAC CGACCTGTTC CGTAGCCTGA TCGACGCGAC CTCCTCGGCG
CTCGGCCGCG GGCCGGGCGA GGAGGACGCA GCCTCGTTCC GCGTCATCGC CGACCATCTG
CGCTCGTCGT CGTTCCTGAT CGCCGATGGC GTGCTGCCGT CGAACGAAGG CCGCGGCTAC
GTGCTGCGCC GGATCATGCG CCGCGCGATG CGCCATGCGC AGCTGCTCGG CGCCAGCGAG
CCGCTGATGT GGCGGCTGGT GTGGGCGCTG GTGCGCGAGA TGGGCCAGGC CTATCCCGAG
CTGGTGCGCG CCGAGGCGAT GATCGAGGAA ACGATGCGCC TGGAAGAGAC CCGCTTCCGC
AAGACGCTCG ATCGCGGCCT CGCGATCCTC GACGAGAAGA GCGCGTCGCT GAAGAAGGGC
GACATGTTCG ACGGCGACAC CGCCTTCACG CTGTACGACA CCTACGGCTT CCCGCTCGAC
CTGACGCAGG ATGCGCTGCG CAACCGCGGC ATCAGCGTCG ACATCGCGTC GTTCACCGAC
GCGATGGATC GCCAGCGCGC CAAGGCGCGG GCGTCGTGGG CCGGCAGCGG CGAGGCCGCG
ACCGAGACGG TCTGGTTCGG CCTGCGTGAG AAGCTCGGCG CCACGGAGTT CCTGGGCTAC
GATACCGAGA CCGCCGAAGG CGTGGTCACT GCGCTGGTCG CGGATGGCAA GGAAGTCGAC
GCGCTGAAGG CCGGCGACAG CGGCGCGATC GTGCTGAACC AGACGCCGTT CTATGCCGAG
TCCGGCGGGC AGGTGGGCGA CACCGGCGTG CTGTCGGGCG ACGGCGTACG CTTCCGCGTC
ACCGATACGC TCAAGAAGGC CGGCGATCTG TTCGTGCATT TCGGCACTGT CGAAGAAGGT
GCCATCAAGC GCGACGCCGC GTTGCAGCTC GACGTCGATC ACGCGCGCCG CTCGTCGATC
CGCGCCAATC ACTCGGCGAC GCATCTGCTG CACGAGGCGC TGCGCCAGGT GCTCGGCGAT
CACATCGCCC AGAAGGGCTC GATGGTGGCG CCCGACCGGC TGCGGTTCGA CTTCGTGCAT
CAGAAGCCGA TCACGCCGGA CGAACTGCGT CGCGTCGAGG ACATCGCCAA CGACATCGTG
CTCGAGAACG ACGAAGTCAC CACCCGGCTG ATGGCGGTCG ACGACGCCCG CGAGGCCGGC
GCCCGCGCGC TGTTCGGCGA GAAATACGGC GACGAGGTCC GCGTGGTGTC GATGGGCAAG
ACGGCGCGCG ACAGCGGCAG CAACGCGCTC GGCTGGTCGG TCGAACTCTG CGGCGGCACC
CACGTCAAGC GCACCGGCGA CATCGGCCTG GTGTCGATCA CCGGCGAGAG CGCGGTCGCC
TCCGGCGTGC GCCGGATCGA GGCGCTGACC GGCCGCTACG CGCGGCAGAG CGCCAATGCG
GCGATCAATA CCGCCAAACA GGCCGCCGCC GAACTACGCA CCACCGTCGA CGACATGCCG
GCGCGGATCG CGGCCTTGAT GGAGGAGCGC AAAAAGCTCG AGCGCGAACT CTCCGACGCC
CGCAAGAAGC TGGCGATGGG CGGGGGCGGT GCGGCCGGCG CGGCCGATGG CGGCGCGGAT
GTCCGCGAGG TCGGCGGCGT CAAGCTGATG GCGCGCGCGG TCGAAGGTAT CGAGATCAAG
GATCTCAAGA GCCTGGTCGA TCAGGGTAAA AAGCAGCTCG GCTCCGGCGT GATCGCGCTG
GTGGCGACCA GCGAGGATGG CAAGGGCTCG ATCGTGGTCG GCGTCACGCC CGATCTGGTG
GCGCGGTTCT CCGCGGTGGA CCTTGTGCGC ACGGCGTCCG TAGTGCTCGG CGGCAAAGGC
GGCGGCGGCA AGCCCGACAT GGCGCAGGCC GGCGGCCCCG ACGGCTCCAA GGCGCAGGCC
GCGCTCGACG CCATCGCCGC GGCGATCGGC GGCTAG
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| Protein sequence | MSGVNDIRSA FLNYFAKNGH DIVPSSPLVP RNDPTLMFTN AGMVQFKNVF TGLEKRPYQR
ATTSQKCVRA GGKHNDLDNV GYTARHLTFF EMLGNFSFGD YFKERAIELA WNLITKEYGL
KKDKLLVTVY HTDDEAASYW KKIAGFSDDR IIRIPTSDNF WAMGDTGPCG PCSEIFIDQG
EHIFGGPPGS PEEDGDRFLE FWNLVFMQYE QVTKDERLPL PRPSIDTGMG LERMANILQG
VDSVFETDLF RSLIDATSSA LGRGPGEEDA ASFRVIADHL RSSSFLIADG VLPSNEGRGY
VLRRIMRRAM RHAQLLGASE PLMWRLVWAL VREMGQAYPE LVRAEAMIEE TMRLEETRFR
KTLDRGLAIL DEKSASLKKG DMFDGDTAFT LYDTYGFPLD LTQDALRNRG ISVDIASFTD
AMDRQRAKAR ASWAGSGEAA TETVWFGLRE KLGATEFLGY DTETAEGVVT ALVADGKEVD
ALKAGDSGAI VLNQTPFYAE SGGQVGDTGV LSGDGVRFRV TDTLKKAGDL FVHFGTVEEG
AIKRDAALQL DVDHARRSSI RANHSATHLL HEALRQVLGD HIAQKGSMVA PDRLRFDFVH
QKPITPDELR RVEDIANDIV LENDEVTTRL MAVDDAREAG ARALFGEKYG DEVRVVSMGK
TARDSGSNAL GWSVELCGGT HVKRTGDIGL VSITGESAVA SGVRRIEALT GRYARQSANA
AINTAKQAAA ELRTTVDDMP ARIAALMEER KKLERELSDA RKKLAMGGGG AAGAADGGAD
VREVGGVKLM ARAVEGIEIK DLKSLVDQGK KQLGSGVIAL VATSEDGKGS IVVGVTPDLV
ARFSAVDLVR TASVVLGGKG GGGKPDMAQA GGPDGSKAQA ALDAIAAAIG G
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