Gene RPB_3733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3733 
Symbol 
ID3911535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4268573 
End bp4270300 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content69% 
IMG OID637885634 
Productpotassium efflux system protein 
Protein accessionYP_487338 
Protein GI86750842 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component
[COG4651] Kef-type K+ transport system, predicted NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.769555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACACA ACAGGGACAT GGATCACAAC ACCCCCCTGA TTTCCACCAT CGTGGCCGGC 
CTGGTGCTGG CGTTCATCCT CGGCGTCGTG GCGCAGCGGC TGCGCGTGTC GCCGCTGGTC
GGCTATCTGC TCGCCGGCGT GGTGATCGGC CCGTTCACGC CGGGTTATGT CGCCGACCAG
AAGCTCGCCA ACGAGCTCGC CGAGATCGGC ATTATTCTCT TGATGTTCGG CGTCGGCCTG
CACTTCTCGC TGAAAGACCT GCTGTCGGTG CGGGCGATCG CCATTCCCGG CGCGGTGGTG
CAGATCAGCG TCGCGACGGC GCTCGGCGTC GGCCTCGGTC ACATGCTCGG CTGGTCGTTC
GGCGGCGGGC TGGTGTTCGG TCTGGCGCTG TCGGTCGCCA GCACCGTCGT GCTGCTGCGC
GCGCTGCAGG AGCGCCGGCT GATCGACAGC GATCGCGGCC GCATCGCGGT CGGCTGGCTG
ATCGTCGAGG ATCTGGCGAT GGTGCTGACG CTGGTGTTGC TGCCGGCGGT GGCGGGCCTG
CTCAAGGGCG AGGCCAACGG CGCGAGCTGG GACAGCGTGG CGGTGCCGAT CGCGCTGACC
CTCGGCAAGG TCGCGGCTTT CGTGGCGTTC ATGCTGGTGG TCGGCCGGCG GATCATTCCG
TGGATGCTGC ACTACGTCGC GCATACCGGC TCGCGCGAAT TGTTTCGGCT GGCGGTGCTG
GCGATCTCGC TCGGCGTCGC GTTCGGGGCG GCGATGCTGT TCGACGTGTC GTTCGCGCTC
GGCGCGTTCT TCGCCGGCAT GATCCTGTCG GAATCCGAAC TCAGCCAGCG CGCCGCCAAC
GAGACGCTGC CGCTGCGCGA CGCCTTCGCG GTGCTGTTCT TCGTCTCGGT CGGCATGCTG
GTCGATCCCG CCATCCTGAT CCGCGAGCCG CTGCCGGTGC TCGCCACCGT GCTGATCATC
GTGTTCGGCA AGTCGCTCGC GGCGTTCCTG ATCGTGCGGA TGTTTGGCCA TCCCAACATG
ACGGCGCTGA CGATCTCGGC GAGTCTGGCG CAGATCGGCG AGTTCTCCTT CATCCTCGCC
AGCCTCGGCG TCAGCCTGGC GCTGCTGCCG GAGCGCGGCC GCGATCTCGT GCTGGCGGGG
GCGATCATTT CCATCCTGCT CAATCCGCTG ATGTTCGCGC TGCTGGATCG GTTCGGCTTG
CGCGAGACGC TGGCGAAGGC GAAGGCGAAG ACGCCGGATC CGGACGCCGC GGTGAACACC
ACGCTCGGCG CGGGGGCCAA GCCGGCGCAT CACGACGGCC ACGTCGTGCT GATCGGCTAT
GGCCGGGTCG GCTCCACCGT CGGCGCGGCG CTGCGTCAGG AGGGCGCGGA CGTGGTGGTG
ATCGAGAACG ACGCCGAGCG CTTGGCGCAG TTGCAGCGCG AGGGCATCAC CGCGGTCGGC
GGCAACGCCG CCGCGCCGGA CATGCTGGAA GCCGCGGAGA TCGCTGGCGC ACGCGGTCTG
CTGGTGGCGA TCCCCGATGC CTTCGAAGGC GGCCAGATTG TCGCCAAGGC CCGAGCGCTG
AACGCCGCTC TGCCGATCAT CGCCCGCGCG CATTCGGCCG AGGAGGTCGC GCATCTGAAG
AGCAACGGCG CCGACGTGGT GATCATGGGC GAGGACGAGA TCGCCCGGGC GATGCTGGCG
AGGCTGGCCG CCGGCGCCGC GCGCCCGGCC GAGAGCGCAA CGGCATAG
 
Protein sequence
MPHNRDMDHN TPLISTIVAG LVLAFILGVV AQRLRVSPLV GYLLAGVVIG PFTPGYVADQ 
KLANELAEIG IILLMFGVGL HFSLKDLLSV RAIAIPGAVV QISVATALGV GLGHMLGWSF
GGGLVFGLAL SVASTVVLLR ALQERRLIDS DRGRIAVGWL IVEDLAMVLT LVLLPAVAGL
LKGEANGASW DSVAVPIALT LGKVAAFVAF MLVVGRRIIP WMLHYVAHTG SRELFRLAVL
AISLGVAFGA AMLFDVSFAL GAFFAGMILS ESELSQRAAN ETLPLRDAFA VLFFVSVGML
VDPAILIREP LPVLATVLII VFGKSLAAFL IVRMFGHPNM TALTISASLA QIGEFSFILA
SLGVSLALLP ERGRDLVLAG AIISILLNPL MFALLDRFGL RETLAKAKAK TPDPDAAVNT
TLGAGAKPAH HDGHVVLIGY GRVGSTVGAA LRQEGADVVV IENDAERLAQ LQREGITAVG
GNAAAPDMLE AAEIAGARGL LVAIPDAFEG GQIVAKARAL NAALPIIARA HSAEEVAHLK
SNGADVVIMG EDEIARAMLA RLAAGAARPA ESATA