| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3731 |
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| Symbol | |
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| ID | 3911533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4265545 |
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| End bp | 4266741 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885632 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_487336 |
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| Protein GI | 86750840 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[S] Function unknown |
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| COG ID | [COG0565] rRNA methylase
[COG2852] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.804508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTT CCGGCACCGA TAAATCCAAG CCCGCTGCGG ACCTGGCCGG TCCCGTTGTG
ATTCTCGTTG AACCTCAACT GGGCGAAAAT ATCGGGATGT GCGCCCGCGC CATGGGTAAT
TTCGGCCTGA AACGTTTACG TCTGGTGAAG CCGCGCGACG GCTGGCCCAA TGTCCATGCC
CGCCGCTCGG CCTCCGGCGC CGATCACATC CTGGACGCGG TCGAACTGTT CGAGACGGTG
GGCGAGGCGG TGGCCGACTG CACGCTGCTG TTCGCCACCA CCGCGCGCGC GCATGATCAG
GCCAAGCCGG TGCGAGGGCC GGAGGCGGCG GCGCAGGAGA TGATCACCGC GGCCGTGGGC
GGCGGCACCG CCGGCATCCT GTTCGGCCGC GAGCGCTACG GCCTCGAGAA CCACGAGGTG
GCGCTCGCCA ACCGCATCGT CACCTTCCCG GTCAACCCCG CCTTCGCCTC GCTGAACCTC
GCCCAGGCCG TGCTGCTGAT GGGCTACGAG TGGTTCAAGC ACGCCACCGG CGGCGCGCTG
CCCTATGCGA TGCCGGAGCG CTCCGAGCCC GCCTCGCAGC ACCAGATGAC GGCGTTCTTC
GACAACCTGG TCGCCGAGCT CGACCGCGTG GAATTTCTGC GCCCGCCGGA GAAGCGCGAC
ACCATGCTGG TCAATCTGCG CAACATCTTC ACCCGGATGG ACCCGACCAG GCAGGACATC
CACACGCTGC ACGGCGCGGT GATGGCGATC GCCGAGGGCC GCAAGGGCCC AGCCAAGGGC
GGCGTGCTCG ACGGCGCGCA GGCGACCAAG CTGCGCGCGC TGTTGGCCGA GCGCGCCGCC
GCGGGCCATG GCGACGACGC CGGCTCGATG CGCGGGCTGG CGCGAATGCT CCGCCGCAAC
CCGACCGACG CCGAGCGGCT GCTCTGGGAG CACCTGCGCA AGGACCGCCG CTTCGCCGGC
CAATTCAAGC GCCAGACCCC GGTCGGCCGT CACATCCCGG ATTTCGTCTC GTTCCCCCAC
CGCATCGCGA TCGAGCTGGT CAATCCGGAC GAAAGCGACG CGATCGCGAC CGACCGCGCG
GCGCGCAAGG ACTGGCTGGA AGCGCGCGAC TATCGCGTCG TGCTGATCGA GGCGGCGATG
GTCGAGCGGG ATATCGCCGA GGTGCTGGGG CGGCTGGAGG CGGTGGTGAA GGGGTAG
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| Protein sequence | MAGSGTDKSK PAADLAGPVV ILVEPQLGEN IGMCARAMGN FGLKRLRLVK PRDGWPNVHA
RRSASGADHI LDAVELFETV GEAVADCTLL FATTARAHDQ AKPVRGPEAA AQEMITAAVG
GGTAGILFGR ERYGLENHEV ALANRIVTFP VNPAFASLNL AQAVLLMGYE WFKHATGGAL
PYAMPERSEP ASQHQMTAFF DNLVAELDRV EFLRPPEKRD TMLVNLRNIF TRMDPTRQDI
HTLHGAVMAI AEGRKGPAKG GVLDGAQATK LRALLAERAA AGHGDDAGSM RGLARMLRRN
PTDAERLLWE HLRKDRRFAG QFKRQTPVGR HIPDFVSFPH RIAIELVNPD ESDAIATDRA
ARKDWLEARD YRVVLIEAAM VERDIAEVLG RLEAVVKG
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