Gene RPB_3713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3713 
Symbol 
ID3911515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4249971 
End bp4252181 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content67% 
IMG OID637885615 
Productphosphoribosylformylglycinamidine synthase II 
Protein accessionYP_487319 
Protein GI86750823 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 
TIGRFAM ID[TIGR01736] phosphoribosylformylglycinamidine synthase II 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.755949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTC CAGAGCCGAA AATCACCCCG GAATTGATCG CCAGCCATGG CCTCAAGCCG 
GACGAATATC AGCGGATTCT CGACCTGATC GGGCGCGAGC CGACGTTCAC CGAGCTCGGC
ATCTTTTCGG CGATGTGGAA CGAGCATTGC TCGTACAAAT CCTCGCGGAT CCATCTGAAG
GGGCTGCCCA CCAAGGCGCC GTGGGTGCTG CAGGGGCCGG GCGAGAACGC CGGCGTGATC
GACATCGGCG ACAACCAGGC CGTGGTCTTC AAGATGGAGA GCCACAACCA CCCGAGCTAT
ATCGAGCCGT ATCAGGGCGC CACCACCGGC GTCGGCGGCA TCCTGCGCGA CGTCTTCACC
ATGGGCGCGC GGCCGATCGC CTGCCTCAAT GCGCTCTCCT TCGGCGATCC GAGCCATCCC
AAGACCCGCC ACCTCGTCTC GGGCGTCGTC GCCGGCGTCG GCGGCTACGG CAATTCGTTC
GGCGTGCCCA CCGTCGGCGG CCAGACCCGG TTTCACACCC GCTATGACGG CAACATCCTG
GTCAACGCGA TGGCGGTCGG CCTCGCGGAT TCCGACAAGA TCTTCCTCGC CGCGGCGAGC
GGCGTCGGCA TGCCGATCGT CTATCTCGGT TCCAAGACCG GCCGCGACGG CATGGGCGGC
GCCACCATGG CGTCGGCCGA GTTCGACGAG GGCTCGGAAG AGAAGCGTCC GACCGTGCAG
GTCGGCGATC CCTTCGCCGA GAAGCTGCTG CTGGAAGCCT GTCTGGAGAT CATGGCCAAG
GATTGCGTGA TCGCGATCCA GGACATGGGC GCGGCCGGCC TGACCTGCTC GGCGGTGGAA
ATGGGCGCCA AGGGCGACCT CGGCGTCGAT CTCGATCTCG ACGCGGTGCC GACCCGCGAG
ACCGGCATGA CCGCCTACGA GATGATGCTC TCCGAGAGCC AGGAGCGGAT GCTCATGGTG
TTGAAGCCGG AGAAGGAAAA GGAAGCCGAA GAGATCTTCA GGAAGTGGGG CCTCGACTTC
GCGATCGTCG GCTACACCAC GCCGACCAAG CGCTTCGTGG TCAAGCACGG CGGCGCGGTG
AAGGCCGATC TGCCGATCAA GGAACTCGGC GACGAGGCGC CGCTGTACGA CCGCCCGCAC
GTGCCGTCGC CGAAGCTGCC CGTCATCCAC GCCCGCGAGG TCAATGCGCC GATGCCGGTG
CCCGAGGCGC TGGAGAAGCT GCTGGCGACT CCGGACCTGT GCAGCAAGCG CTGGGTCTGG
GAGCAATACG ACCACGTCAT CGGCGGCAAC ACGCTGCAGC GCCCCGGCGG CGACGCCGCG
GTGGTGCGCG TCGAGGACGG GCCGAAGGGG CTGGCGCTCA CCGTCGACGT CACGCCGCGT
TATTGCGAGG CCGACCCTTA CGAGGGCGGC AAGCAGGCGG TGGCGGAGGC CTATCGCAAC
ATCACCGCGG TCGGCGGCAA GCCGCTGGCG ATCACCGATA ACCTCAATTT CGGCAATCCG
GAGCGGCCCG AGATCATGGG CCAGCTGGTC GGCTGCCTGA AGGGCATCTC GGAAGCCTGC
ATCGCGCTGG ATTCGCCGAT CGTGTCCGGC AACGTCTCGC TCTACAACGA GACCTCGGGC
CGCGGCATCC TGCCGACGCC CTCGATCGGC GGCGTCGGCC TGCTCGACGA TTTCACCAAA
TCGGCGACGC TCGCCTTCAA GGCCGAGGGC GAGGCGATCC TGCTGATCGG CGAGACCCAT
GGCTGGCTCG GTCAATCCGT GTATTTGCGC GACGTCTGCG GCCGCGAAGA GGGCGCGCCG
CCCCCGGTCG ATCTGGCCTG CGAGAAGCGC CACGGCGACG TCGTCCGCGG CATGATCCAC
GCCGGCACCG CGACCGCCGT GCACGATTTA TCCGACGGTG GCTTGTTAGT TGCGCTCGCC
GAAATGGCGA TCAGCGGCAA TATCGGCGCG TCGCTCGATG CGCCGCCGGA TTCGACCGTC
GCGCACGCTT GGTGGTTCGG CGAGGACCAG GGCCGCTATC TCGTCACCGT GAAGGAAGAC
GATCTGCTGA CCGTGCTGTC GAAGCTGAAG AGCGTCGGCG TGCCCTGCAC GCAGATCGGC
ACCACCGGCG GCCACACGCT GAAGATCGAC GGCGAACGCG CGATCGACGT GAAGGCGCTA
CGCCACGCCC ACGAGCACTG GCTGCCGGAT TATATGGCGG GGAAGAACTA A
 
Protein sequence
MSAPEPKITP ELIASHGLKP DEYQRILDLI GREPTFTELG IFSAMWNEHC SYKSSRIHLK 
GLPTKAPWVL QGPGENAGVI DIGDNQAVVF KMESHNHPSY IEPYQGATTG VGGILRDVFT
MGARPIACLN ALSFGDPSHP KTRHLVSGVV AGVGGYGNSF GVPTVGGQTR FHTRYDGNIL
VNAMAVGLAD SDKIFLAAAS GVGMPIVYLG SKTGRDGMGG ATMASAEFDE GSEEKRPTVQ
VGDPFAEKLL LEACLEIMAK DCVIAIQDMG AAGLTCSAVE MGAKGDLGVD LDLDAVPTRE
TGMTAYEMML SESQERMLMV LKPEKEKEAE EIFRKWGLDF AIVGYTTPTK RFVVKHGGAV
KADLPIKELG DEAPLYDRPH VPSPKLPVIH AREVNAPMPV PEALEKLLAT PDLCSKRWVW
EQYDHVIGGN TLQRPGGDAA VVRVEDGPKG LALTVDVTPR YCEADPYEGG KQAVAEAYRN
ITAVGGKPLA ITDNLNFGNP ERPEIMGQLV GCLKGISEAC IALDSPIVSG NVSLYNETSG
RGILPTPSIG GVGLLDDFTK SATLAFKAEG EAILLIGETH GWLGQSVYLR DVCGREEGAP
PPVDLACEKR HGDVVRGMIH AGTATAVHDL SDGGLLVALA EMAISGNIGA SLDAPPDSTV
AHAWWFGEDQ GRYLVTVKED DLLTVLSKLK SVGVPCTQIG TTGGHTLKID GERAIDVKAL
RHAHEHWLPD YMAGKN