Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3709 |
Symbol | |
ID | 3911511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4246466 |
End bp | 4247656 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885611 |
Product | low termperature growth protein |
Protein accession | YP_487315 |
Protein GI | 86750819 |
COG category | [S] Function unknown |
COG ID | [COG4292] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.848697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACGG AGGCATCGAG CGCCGCCAAT CTGCTCCGCG TGCGAAGACC GCACGAACAC AGCCGCGTCA CCTATGTCGA ATTGTTCTTC GACCTGGTGT TCGTGTTCGC CGTCACCCAG GTGTCGCATT TCCTGCTGGG GCATGTCACG CCGGTGGGCG CGCTGCAGGC GCTGATCCTG ATGTCGGCGA TCTGGTGGGT GTGGGTCTAC ACTTCCTGGA TCACCAACTG GCTCGACCCC GAACTCACCC GCGTCCGGCT GATGCTGTTC GCGCTGATGA GCGCCGGGTT GCTGCTGTCG ACCTCGATCC CGCGCGCCTT CGAGAGCCGC GGCCTCGCTT TCGCGCTGGC CTTCGTGGCG ATGCAGGTCG GACGCAGTGC CTTCGCCTTT CTCTCGACGC CGAAAGCCGA GCCGCTGCGG ATCAATTTCT TCCGGATCAC GAGTTGGCTG TGCGTCAGCG GCGTGTTCTG GATCGCCGGC GGCCTGCTCG ATGGCCCCGC GCGGATCGCG CTGTGGATGA TCGCGCTGGC GATCGAATAT GCCGGGCCGG TGGCGGGCTT CTACGTGCCG TGGATCGGCG CCTCGACGAC GCAGGATTGG AGCGTCGAGG GCGGCCATAT GGCGGAGCGC TGCGCGCTGT TCATCATCAT CGCGCTCGGC GAATCGATCG TGGTGACGGG CGCGACCTTC GCCGGCATCG AATGGACCGT GACGACCTTC GCCGCCTTCG GCTCGACGCT GATCGGCGCG ATCGCGATGT GGTGGATCTA CTTCCACATC GGCGTGCATC TCGGCTCGGA GAAGATCTCG CAGTCGAGCG ATCCCGGCCG GCTGGCGCGG CTCGCCTACA CCTACATCCA CCTGCCGATC GTCGCCGGAA TCGTCGTCAC CGCGGTCAGT GACGAACAGG TGCTGGCGCA TCCCAGCGGC CACGCCGACA TCAAGGTGAC CCTCACCACG ATCGGCGGCC CGCTGCTGTT CCTGATCGGC GTGCTCTTGT TCAAGCGCGC GGTGCGCGGC CATCTGCAGC CGTCGCACAT GGCCGGCATC GCCGCGCTGC TGGCGCTGAT CCCGGTGGCG CCGCTGATGG CCCCGCTGGC GCTGTCGATC GCGACCACGG CGATCCTGTT GGCGGTCGGC ATCTGGGAAG CCGTCTCGCT CGGCGCCGCC GCGCGCTCGC CGGTGGAGTG A
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Protein sequence | MTTEASSAAN LLRVRRPHEH SRVTYVELFF DLVFVFAVTQ VSHFLLGHVT PVGALQALIL MSAIWWVWVY TSWITNWLDP ELTRVRLMLF ALMSAGLLLS TSIPRAFESR GLAFALAFVA MQVGRSAFAF LSTPKAEPLR INFFRITSWL CVSGVFWIAG GLLDGPARIA LWMIALAIEY AGPVAGFYVP WIGASTTQDW SVEGGHMAER CALFIIIALG ESIVVTGATF AGIEWTVTTF AAFGSTLIGA IAMWWIYFHI GVHLGSEKIS QSSDPGRLAR LAYTYIHLPI VAGIVVTAVS DEQVLAHPSG HADIKVTLTT IGGPLLFLIG VLLFKRAVRG HLQPSHMAGI AALLALIPVA PLMAPLALSI ATTAILLAVG IWEAVSLGAA ARSPVE
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