Gene RPB_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3706 
Symbol 
ID3911508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4243986 
End bp4244957 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content67% 
IMG OID637885608 
Producthypothetical protein 
Protein accessionYP_487312 
Protein GI86750816 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGC ACGTCGCCGT GCACGCGCGA GCGCATCAGC TCGACGCGCC GACCCGAACC 
TTCGCGGCCG ACGTGCTGGA CGGCCTGTCG CGGCCGCAGA AGTCGCTGTC GCCGAAATAC
TTCTACGACG ACGCCGGCTC CGAGCTGTTC GTCGAGATCA CCAAGCTGCC GGAATACTAC
CCGACCCGCA CCGAGCTCGG CATCCTGCGC GACCGCGCGG GCGAGATCGC CGCGCTGATT
CCGCCGAACG CCGCCATCGT CGAATTCGGC GCCGGCGCCA CCACCAAGAT CCGGCTGCTG
CTCGCCGCCC ACGCGGTCGC GGCCTATGTG CCGGTCGACA TTTCCGGCGA TTTCATCACC
GCGCAGGCCG AAGCGCTGCG TGGTGACTTC CCCGACCTCG CGATCCATCC GGTGGCTGCC
GACTTCACCG AGCCTTTCGC GCTGCCCGAG GCGGTGCGCG ATCTGCCGAA GGTCGGCTTC
TTTCCGGGCT CGACGCTCGG CAATTTCGAG CCGCAGGACG CCGCCCGCTT CCTGAACAGC
GCCCGCGACA TTCTGGGCGA CGGCGCGCGG CTGATCATCG GCGTCGATCT GGAAAAGGAC
GAGCGGCTGG TGGTGCCGGC CTATGACGAT GCCGCCGGCG TCACCGCGAA ATTCAATCTC
AACGTGCTGC AGAGGATCAA CCGCGAGCTC GGCGGCGACG TCGACCTGTC GGCGTTCACA
CATCGCGCGA TCTACAATCG CGACCTCCAC CGCATCGAGA TGCATCTGGT CAGCCTGCGC
GACCAGAGCG TGCGCATCCT CGGCGAGGAC ATCGGCTTCC GCGCCGGCGA GACCATCCAC
ACCGAGAACA GCTACAAATA CAGCCTCGCC CGTTTCCGCG CGCTGGCCCG ACAAACCGGC
TGGACCCTGC AGCAGAGCTG GACCGACGCC GACGGCCTGT TCTCGGTGCA TGCGCTGGAG
GCGGAGGGCT GA
 
Protein sequence
MNMHVAVHAR AHQLDAPTRT FAADVLDGLS RPQKSLSPKY FYDDAGSELF VEITKLPEYY 
PTRTELGILR DRAGEIAALI PPNAAIVEFG AGATTKIRLL LAAHAVAAYV PVDISGDFIT
AQAEALRGDF PDLAIHPVAA DFTEPFALPE AVRDLPKVGF FPGSTLGNFE PQDAARFLNS
ARDILGDGAR LIIGVDLEKD ERLVVPAYDD AAGVTAKFNL NVLQRINREL GGDVDLSAFT
HRAIYNRDLH RIEMHLVSLR DQSVRILGED IGFRAGETIH TENSYKYSLA RFRALARQTG
WTLQQSWTDA DGLFSVHALE AEG