Gene RPB_3705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3705 
Symbol 
ID3911507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4242683 
End bp4243939 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content68% 
IMG OID637885607 
Producthypothetical protein 
Protein accessionYP_487311 
Protein GI86750815 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAATA TGTCCTCCGC CGCAGCCACT GTGGTCGATT CTGCTGCTTC CGCCGACACC 
GCAGCCCCTG CTCCGGCCGA TCGCCTCGCC GCGGCCTATC GCGCCGTCCG TGACGAGACC
GAGCGCCGCG CGGCGCCGCT GGGCCCTGAA GATCAGGTGG TGCAGTCGAT GCCGGACGCC
AGCCCGGCGA AATGGCACCG CGCGCATACG ACGTGGTTCT TCGAGCAGTT CCTGCTCGGC
CCGCACAAGC CCGGCTACCA GGTCTTCCAC CCCGACTACG CCTTCCTGTT CAATTCCTAT
TACGTCTCCG CCGGCCCGCG GCACACCCGC GCGGCGCGCG GGCTGCTGAC CCGGCCGGGC
GCCGACGACG TCACCGCCTA TCGGCGCGCG GTCGATGAGG CGATGCTCGG GCTGTTCGCC
GAGGCCGACG ACGCGACGCT GGCCCGGCTC GCGCCGCTGG TCGAGGTCGG GCTGAATCAC
GAACAGCAGC ATCAGGAATT GCTGCTGACC GACATCCTGC ACGCCTTCGC GCAGAACCCG
ATTCCGCCGG CCTACGATCC GGCCTGGACG CTCTCCGCCG CCGACCGCAG CGGCGACGGC
TGGGTCGATC TGCCCGAAGG CATCCATGCG ATCGGCCATA CCGGCGACAG CTTCCATTTC
GACAACGAGA AGCCGGCGCA TCGCGCGCTG GTCGGGCCGG TGAAACTCGC CCGCCACCTC
GTCACCAACG CCGAGTGGCT GCAATTCATG GCCGACGGCG GCTATCGCAC GCCAACGCTG
TGGCTGATGG ACGGCTTTGC GAGCTGCGAA CGCGAGGGCT GGGAAGCGCC GGGTCACTGG
CGTCAGGTCG ACGGCGAGTG GACCATCATG ACGCTCGGCG GGCTGCAGCG CATCGATCCC
GACGCGCCGG TCTGCCATAT CAGCTATTAC GAGGCCGATG CGTTCGCGCG CTGGGCCGGC
AGGCATCTGC CGACCGAGAT GGAATGGGAA GTGGCGGCGC GCGCCGGGCA ATTGAACGAC
GCCTTCGGCC TGGTCTGGCA ATGGACCCGC AGCGCCTATG CGCCCTATCC GGGCTATCGC
GCCATCGAAG GCGCGCTCGG CGAATACAAC GGCAAGTTCA TGGTCAACCA ACTGGTGCTG
CGCGGCTCGT CCTGCGTAAC ACCGGCCGAT CACAGCCGTA TCACCTATCG CAACTTCTTC
TATCCGCACC ACCGCTGGCA GTTCACCGGA CTCCGGCTCG CCGATTACGA CAGCTGA
 
Protein sequence
MPNMSSAAAT VVDSAASADT AAPAPADRLA AAYRAVRDET ERRAAPLGPE DQVVQSMPDA 
SPAKWHRAHT TWFFEQFLLG PHKPGYQVFH PDYAFLFNSY YVSAGPRHTR AARGLLTRPG
ADDVTAYRRA VDEAMLGLFA EADDATLARL APLVEVGLNH EQQHQELLLT DILHAFAQNP
IPPAYDPAWT LSAADRSGDG WVDLPEGIHA IGHTGDSFHF DNEKPAHRAL VGPVKLARHL
VTNAEWLQFM ADGGYRTPTL WLMDGFASCE REGWEAPGHW RQVDGEWTIM TLGGLQRIDP
DAPVCHISYY EADAFARWAG RHLPTEMEWE VAARAGQLND AFGLVWQWTR SAYAPYPGYR
AIEGALGEYN GKFMVNQLVL RGSSCVTPAD HSRITYRNFF YPHHRWQFTG LRLADYDS