Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3686 |
Symbol | |
ID | 3911488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4226202 |
End bp | 4226936 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885588 |
Product | cytochrome c biogenesis protein, transmembrane region |
Protein accession | YP_487292 |
Protein GI | 86750796 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0785] Cytochrome c biogenesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCATG ACGTCTCGAT CCCCGCGGCG CTGCTCGCCG GCTTGGTCAG CTTCCTGTCG CCCTGCGTGC TCCCGCTGGT GCCGCCATAC CTGATCTATC TGACCGGCGC GACCATCGAG CACGTCGCCG CCGACGAATC CCAGCGCAAT TCGAAACGCG CCGTGATGAT CTCGGCGCTG GTCTTCGTGC TCGGCTTCTC GACCGTGTTC GTGGCACTCG GCGCCAGCGC CAGCCTGGTC GGCGGCCTGA TCCGGGCCTG GTCGGCCGAA CTCGCGATCG TCGCCGGCAT CGTCATCATT CTGATGGGGC TGCATTTCCT CGGCCTGACG CGGCTCAACA TCCTGATGCG CGAGGGCCGG CTGCCGATCC CAAAACCAGT GGGCCTGTGG GGCGCCTATG TGATGGGGCT CGCCTTCGCG TTCGGCTGGA CGCCGTGCAT CGGCCCGATC CTCGCCGCGA TCCTGTCGGT CGCCGCGGCC GAAGCCACGG TGGCGAAGGG CGCGGGGCTA CTGGCGGTCT ATTCCGCGGG CCTCGGCATT CCGTTCCTGC TCGCGGCCTT GATGGTCGAG CAGTTCTCCG GCCTGTTCGC GCGGATGAAG AAGCACCTCG CCATCGTCGA ACGCGTGATG GGCGCGCTGA TGGTTCTGAC CGGCATCGCC TTCCTCACCG GCGCCATCAC CGACGTCAGC GTCTGGCTGC TGAATACGTT CCCGGCGCTG GGGACGATCG GGTGA
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Protein sequence | MIHDVSIPAA LLAGLVSFLS PCVLPLVPPY LIYLTGATIE HVAADESQRN SKRAVMISAL VFVLGFSTVF VALGASASLV GGLIRAWSAE LAIVAGIVII LMGLHFLGLT RLNILMREGR LPIPKPVGLW GAYVMGLAFA FGWTPCIGPI LAAILSVAAA EATVAKGAGL LAVYSAGLGI PFLLAALMVE QFSGLFARMK KHLAIVERVM GALMVLTGIA FLTGAITDVS VWLLNTFPAL GTIG
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