| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3685 |
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| Symbol | |
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| ID | 3911487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4224793 |
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| End bp | 4225908 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637885587 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_487291 |
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| Protein GI | 86750795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.28436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA AGCTTCTCGG TTTGGCATTC GGCGCGTCGC TGGCGCTGTC GACCACGGCG
CTGGCACAGG ACATCAAGGT CGCGGTCTCG GGGCCGATGA CCGGCAGCGA ATCCGCGTTC
GGACGGCAGT TGAAGAACGG CGCCGATCAG GCGGTCGCCG ATCTCAACGC CGGCGGCGGC
GTGCTCGGCA AGAAGCTGGC GCTGCAGATC GGCGACGACG CCTGCGATCC CAAGCAGGCA
CGCTCTATCG CCGAGAAACT GGCAGGCGAA GGCATCCCGT TCGTCGCCGG GCATTTCTGT
TCGTCGTCGT CGATCCCGGC GTCGGAAGCC TATGCGGACG GCAACGTGCT GCAGATCACG
CCCGCCTCGA CCAACCCGCT GTTCACCGAG CGCAAGCTGT GGAACGTGCT GCGCGTCTGC
GGCCGCGACG ATCAGCAGGG CCTGATCGCC GCCGAGTACA TCACCAAGAA TTTCAAGGGC
AAGAACGTCG CCATCCTCAA CGACAAGACC ACCTACGGCA AGGGTCTCGC CGATGAAACC
AAGAAGGCGC TGAACAAGGC CGGCTTCCAG GAGAAGATGT TCGAGTCCTA CAACAAGGGC
GACAAGGACT TCAATTCGAT CGTCTCGCGG CTGAAGCGCG ACTCGATCGA TCTCGTCTAT
ATCGGCGGCT ACCATCAGGA AGCCGGGCTG ATCCTGCGGC AGATGCGCGA CCAGGGCCTG
AAGACCGCGA TGATGGCCGG CGACGCGATG AACGACAAGG AATTCGCCTC GATCACCGGC
CCGCTCGCCG AGGGCACGCT GTTCACCTTC GGCCCCGACC CGCGCAACAA GCCGACCGCC
AAGGCGATCG TCGAGAAGTT CAAGGCCAAG GGCATCGATC CGGAAGGCTA CACGCTCTAC
ACCTACGCCG CGTTCCAGGT CTGGTCGCAG GCCGTCGCCA AGGCCAAGAC CACCGATCCG
AAGAAGGTGA TCGACACCAT CAAGGCCGGC GAATGGGACA CCGTGCTCGG CAAGATGGCG
TTCGACGCCA AGGGCGACAT CAAGGCGATC GACTACGTCG TCTACAAATG GGACGCCAAG
GGCAACTACG CGGAAATCCC CGGCAAGGCG ATGTGA
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| Protein sequence | MKLKLLGLAF GASLALSTTA LAQDIKVAVS GPMTGSESAF GRQLKNGADQ AVADLNAGGG
VLGKKLALQI GDDACDPKQA RSIAEKLAGE GIPFVAGHFC SSSSIPASEA YADGNVLQIT
PASTNPLFTE RKLWNVLRVC GRDDQQGLIA AEYITKNFKG KNVAILNDKT TYGKGLADET
KKALNKAGFQ EKMFESYNKG DKDFNSIVSR LKRDSIDLVY IGGYHQEAGL ILRQMRDQGL
KTAMMAGDAM NDKEFASITG PLAEGTLFTF GPDPRNKPTA KAIVEKFKAK GIDPEGYTLY
TYAAFQVWSQ AVAKAKTTDP KKVIDTIKAG EWDTVLGKMA FDAKGDIKAI DYVVYKWDAK
GNYAEIPGKA M
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