Gene RPB_3684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3684 
Symbol 
ID3911486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4223885 
End bp4224625 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content67% 
IMG OID637885586 
ProductABC transporter related 
Protein accessionYP_487290 
Protein GI86750794 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.218691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCG CCCCGCCTCT CCTCAGTATC GAAAACCTGC GCGCAGCCTA CGGCAAGATC 
GAGGCGCTGA AGGGCGTCGA TCTCGATATC AAGCCCGGCG AGATCGTCGC GCTGATCGGC
GCCAACGGCG CCGGCAAGTC GACGCTGATG ATGACGATTT TCGGCAAGCC GCGCGCCAAA
ACCGGCCGCA TCGTATTCGA CGGCATCGAC ATCACACAGA TGCCGACCCA CCTGATCGCG
CGGATGAGCA TCGCGCAATC GCCCGAGGGC CGGCGGATCT TTCCGCGGAT GAGCGTCGCC
GAAAATCTGC AGATGGGCGC CGATGCCGGT GACAGCACCG ATGCCGAGCG CGCCGACGTG
CTGGAACGCG TACTGACGCT GTTTCCGCGG CTGCGCGAAC GCTATGGCCA GCGCGGCGGC
ACGCTATCGG GCGGCGAACA GCAGATGCTG GCGATCGGCC GCGCGCTGAT GAGCCGGCCG
CGGCTGCTGC TGCTCGATGA GCCCTCGCTC GGCCTCGCGC CGCTGATCAC CCGGCAGATC
TTCGAGGCCA TCCGCACGCT GAACAGGCAG GACGGCCTGA CCGTGCTGAT CGTCGAGCAG
AACGCCAACC ACGCGCTGCG GCTGGCGCAT CGCGGCTACG TGCTGGTCAA CGGACTGATT
ACCCTGAGCG GCAGCGGCGC CGAATTGCTG GCGCGCCCGG AAGTCCGCGC CGCCTATCTC
GAAGGCGGCC GCAAGGTGTG A
 
Protein sequence
MTSAPPLLSI ENLRAAYGKI EALKGVDLDI KPGEIVALIG ANGAGKSTLM MTIFGKPRAK 
TGRIVFDGID ITQMPTHLIA RMSIAQSPEG RRIFPRMSVA ENLQMGADAG DSTDAERADV
LERVLTLFPR LRERYGQRGG TLSGGEQQML AIGRALMSRP RLLLLDEPSL GLAPLITRQI
FEAIRTLNRQ DGLTVLIVEQ NANHALRLAH RGYVLVNGLI TLSGSGAELL ARPEVRAAYL
EGGRKV