Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3684 |
Symbol | |
ID | 3911486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4223885 |
End bp | 4224625 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885586 |
Product | ABC transporter related |
Protein accession | YP_487290 |
Protein GI | 86750794 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.218691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCG CCCCGCCTCT CCTCAGTATC GAAAACCTGC GCGCAGCCTA CGGCAAGATC GAGGCGCTGA AGGGCGTCGA TCTCGATATC AAGCCCGGCG AGATCGTCGC GCTGATCGGC GCCAACGGCG CCGGCAAGTC GACGCTGATG ATGACGATTT TCGGCAAGCC GCGCGCCAAA ACCGGCCGCA TCGTATTCGA CGGCATCGAC ATCACACAGA TGCCGACCCA CCTGATCGCG CGGATGAGCA TCGCGCAATC GCCCGAGGGC CGGCGGATCT TTCCGCGGAT GAGCGTCGCC GAAAATCTGC AGATGGGCGC CGATGCCGGT GACAGCACCG ATGCCGAGCG CGCCGACGTG CTGGAACGCG TACTGACGCT GTTTCCGCGG CTGCGCGAAC GCTATGGCCA GCGCGGCGGC ACGCTATCGG GCGGCGAACA GCAGATGCTG GCGATCGGCC GCGCGCTGAT GAGCCGGCCG CGGCTGCTGC TGCTCGATGA GCCCTCGCTC GGCCTCGCGC CGCTGATCAC CCGGCAGATC TTCGAGGCCA TCCGCACGCT GAACAGGCAG GACGGCCTGA CCGTGCTGAT CGTCGAGCAG AACGCCAACC ACGCGCTGCG GCTGGCGCAT CGCGGCTACG TGCTGGTCAA CGGACTGATT ACCCTGAGCG GCAGCGGCGC CGAATTGCTG GCGCGCCCGG AAGTCCGCGC CGCCTATCTC GAAGGCGGCC GCAAGGTGTG A
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Protein sequence | MTSAPPLLSI ENLRAAYGKI EALKGVDLDI KPGEIVALIG ANGAGKSTLM MTIFGKPRAK TGRIVFDGID ITQMPTHLIA RMSIAQSPEG RRIFPRMSVA ENLQMGADAG DSTDAERADV LERVLTLFPR LRERYGQRGG TLSGGEQQML AIGRALMSRP RLLLLDEPSL GLAPLITRQI FEAIRTLNRQ DGLTVLIVEQ NANHALRLAH RGYVLVNGLI TLSGSGAELL ARPEVRAAYL EGGRKV
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