Gene RPB_3658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3658 
Symbol 
ID3911460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4199472 
End bp4200605 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content64% 
IMG OID637885560 
Productdolichyl-phosphate beta-D-mannosyltransferase 
Protein accessionYP_487264 
Protein GI86750768 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.979079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAG CCAGTCCAGC GGCCTTGGAA ACGTGCGCGG CGCCATCGTC CGCGCTTCAG 
TTGTCCGTCG TCGTTCCCAC CTTCAACGAG CGCGACAATG TCGAGGTGCT GTTCCACAAG
CTGGAAACGG CACTCGCGGG CGTGGCTTGG GAAGTCATCT TCGTCGACGA CAACTCGCCG
GACGGCACTT GGAACGTGGT GCGCGAACTG GCGCTGCGCG AACCGCGGGT GCGTTGCATC
CGGCGGATCG GGCGACGCGG GCTTTCCGGC GCCTGTATCG AGGGCATTCT CGCCGCCAGC
GCGCCGTTTG CCGCGGTGAT GGATGCCGAC CTGCAGCACG ACGAGACTCA ACTGCCCAAG
ATGCTCGGCC TGGTCGAAAG CGGCTCGGCC GATCTCGTGG TCGGCAGCCG CTATGTGGCA
GGCGGCAGCG CCGACAGCTT CGACCGGCAG CGGGCCGGCT TCAGTGCGCT GGCGACCGCG
CTGGCCCGCA AGGTCCTCAA GGTCGAGGTC GCCGATCCAA TGAGCGGCTT CTTCATGATC
CGGCGCGATC GTTTCGAAGA GCTTGCGCCG AAGCTTTCGA CCCAGGGCTT CAAGATCCTG
CTCGACGTCG TCGCCACCGG GCAGGGCAGC CTGCGCACCA TCGAGGTGCC TTACAGCTTC
GGATCCCGGC TGCACGGCGA AAGCAAGCTC GACTCGATGG TGGCGCTGGA TTTCCTCGGC
CTGGTGCTGG CGAAGTTCAG CAACGATATC CTATCCCTTC GGTTCATCCT TTTCGCGCTG
GTGGGCTCGA CCGGCGTCAT CGTGCATTTC CTGACGCTGT ACCTGGTGCT GAAGGTGTTC
GAGCAGCCGT TCGCCGAGGC ACAGGGCGCC GCGGCTGTCG TGGCGATGAC CAGCAACTTC
ATCCTCAACA ACTTCCTGAC CTATCGCGAC CAGCGACTGA AGGGGTTTGC CATCCTTCGC
GGGTTGTTGC TGTTCTATCT GGTGTGCGGC GTCGGTCTGC TCGCCAATGT CGGCGTCGCC
TTCGCGGTTT ACAATGAGCA CATCACTTGG TGGCTGGCGG GGGCTGCCGG CGCGGTGATG
GGCGTGGTGT GGAACTACGC GATGTCGGGC CTGTTCGTCT GGCGCAAGCG TTGA
 
Protein sequence
MNQASPAALE TCAAPSSALQ LSVVVPTFNE RDNVEVLFHK LETALAGVAW EVIFVDDNSP 
DGTWNVVREL ALREPRVRCI RRIGRRGLSG ACIEGILAAS APFAAVMDAD LQHDETQLPK
MLGLVESGSA DLVVGSRYVA GGSADSFDRQ RAGFSALATA LARKVLKVEV ADPMSGFFMI
RRDRFEELAP KLSTQGFKIL LDVVATGQGS LRTIEVPYSF GSRLHGESKL DSMVALDFLG
LVLAKFSNDI LSLRFILFAL VGSTGVIVHF LTLYLVLKVF EQPFAEAQGA AAVVAMTSNF
ILNNFLTYRD QRLKGFAILR GLLLFYLVCG VGLLANVGVA FAVYNEHITW WLAGAAGAVM
GVVWNYAMSG LFVWRKR