| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3656 |
|---|
| Symbol | |
|---|
| ID | 3911458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4196618 |
|---|
| End bp | 4197835 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637885558 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_487262 |
|---|
| Protein GI | 86750766 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.395631 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA CGGTCTTGAT TGCTGGAGCC GGACACGCCG GATTTCAGGT CGCCGTCTCG
CTGCGCCAAG CCAAGTACAC CGGCCGCATC GCCCTGATCA ACGACGAGAA GCATCTGCCG
TATCAGCGGC CGCCGCTGTC GAAGGCCTAT CTCAAGAGCG GTGGCGACCC CAATTCGTTG
ATGTTCCGGC CGGAAAAATT CTTCCAGGAT CAGACCATCG AATTGATCGA CGGCCGCGCC
GTCGCGATCG ACCGCGACGC CAAGACGCTG CTGCTCGCCT CCGGCGACAA GATCGAATAC
GGCCATCTGG TGCTCGCCAC CGGCGCCCGC AACCGCCAGC TCGACGTGCC GAACGCCACG
CTGGACGACG TGCTGTATCT GCGCACGCTC GACGAAAGCG AAGTGGTGCG GCAGCGGATG
CCGGAGAAGA AGCACGTCGT GGTGATCGGC GCCGGATTCA TCGGACTGGA ATTCGCCGCC
ACCGCACGCG GCAAGGGCAT GGAAGTCGAC GTCGTCGAAC TCGCCCCGCG GGTGATGGCG
CGCGCGGTGA CGCCGGAGAT CTCGAGCTAC TTCCACGACC GCCACACCGC GGCCGGCATT
CGTATCCACT ACGGGGTCCG CGCCACTGAG ATCGAAGGCG AAGACGGTCG CGTCACCGGC
GTCGCGCTGA GCGACGGCCG GACCTTGCCG TGCGATCTGG TGGTCGTCGG GGTCGGCGTG
ATCCCGAATG TCGAACTGGC CTCGGCGGCC GGGTTGCCGA CCGCAGCCGG CATCATCGTC
AACGAGCAGC TTCTCACCGA AGATCCGAAC ATCTCGGCCA TCGGCGATTG CGCGCTGTTC
AACAGCGTAC GGTTCGGCGA GGTGATGCGC GTGGAATCGG TGCAGAACGC CACCGACCAG
GCGCGCTGCG TCGCGGCGCG GCTGACGGGT TCCCCCGCGA CTTATGACGG CTATCCGTGG
TTCTGGTCCG ATCAGGGCGA CGACAAGCTG CAGATCGCCG GTCTCACCGC CGGCTTCGAC
CAGGTCGTGC TGCGCGGCAG CGTCGCCGAG CGCTCGTTCT CGGCGTTCTG CTACAAGGAC
GGCCAACTGA TCGGCGTCGA ATCCGTCAAC CGCGCGGCCG ACCATGTGTT CGGCCGCAAA
ATCCTGCCGC TCGGCAAGTC GGTGACGCCG GAGCAGGCCG CCGATCTCAG CTTCGACCTA
AAGAAGGCGA TGGCGTAA
|
|---|
| Protein sequence | MNDTVLIAGA GHAGFQVAVS LRQAKYTGRI ALINDEKHLP YQRPPLSKAY LKSGGDPNSL
MFRPEKFFQD QTIELIDGRA VAIDRDAKTL LLASGDKIEY GHLVLATGAR NRQLDVPNAT
LDDVLYLRTL DESEVVRQRM PEKKHVVVIG AGFIGLEFAA TARGKGMEVD VVELAPRVMA
RAVTPEISSY FHDRHTAAGI RIHYGVRATE IEGEDGRVTG VALSDGRTLP CDLVVVGVGV
IPNVELASAA GLPTAAGIIV NEQLLTEDPN ISAIGDCALF NSVRFGEVMR VESVQNATDQ
ARCVAARLTG SPATYDGYPW FWSDQGDDKL QIAGLTAGFD QVVLRGSVAE RSFSAFCYKD
GQLIGVESVN RAADHVFGRK ILPLGKSVTP EQAADLSFDL KKAMA
|
|---|
| |