| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3649 |
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| Symbol | |
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| ID | 3911451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4186637 |
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| End bp | 4189744 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637885551 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_487255 |
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| Protein GI | 86750759 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.711351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCCC TCACCGATAT CTTCATCAAG CGGCCGGTGC TGTCGCTGGT GGTCAGCCTG
CTGATCCTGC TGATCGGCTT CAGGGCCGCG ACCACGCTGC CGATCCGCCA GTATCCCAAG
CTGTCGAACA CCGTGATCAC CGTCACCACG GTGTATCCCG GCGCCTCGCC GGACCTGATG
CAGGGCTTCA TCACCACCCC GCTCGAGCAG GCCGTCGCCT CGGCCGAGGG CATCGACTAC
ATCACCTCGT CCTCGACCCA GGGCCAGAGC CTGATCACGG TCTACGTCAA GCTCAATTTC
GATCCGAACC AGGCGCTCAC CGAGGTTCTG GCGAAGGTCA ATTCGGTCAA ATATCTGATC
CCGCGCGAAG CCAACGATCC GGTCATCGTC AAATCCACCG GCGAGACCAC GGCGGTGATG
TATATCGGCT TCTCCAGCAA CGAGCTCTCC GGCTCGGCGA TCTCGGACTA TCTGACGCGC
GTGGTGCAGC CGGTGCTGTC CACCGTCGAA GGCGTGGCCT CCGCCGACAT CCTCGGCGGC
CAGACCTTCG CGATGCGGAT CTGGCTCGAT CCGATCCGCA TGGCCGGGCG CGGGGTGTCG
CCCGACGATG TCGCCGCCGC GATCCGCGCC AACAACTTCC AGGCGGCCGC GGGTCAGACC
AAGGGCTATC TCACGGTCTC CAACGTCAGT ACCAACGCCG ATCTCCAGAA CGTCGACCAG
TTCAAGCAGA TGACGGTGAA GGCCAAGGAC GGCGGCTTCA TCAGGTTGCA GGACGTCGCC
ACGGTCGAAC TCGCCGCGCA GAGCACCGAT TCCAGCGTGG CGTTCTCCGG CGAGCGGGCG
ATCTTCATCG GCGTGCAGGC GACGCCGCAG GGCAACCCGC TCAATATCGT CAGCGGTGTT
CGTGCGCTGT TTCCGGATAT CGAGCGCAAT CTGCCGCCGT CGCTGAAGAT GAAGGTCGCC
TATGATTCGA CCAAATTCAT CCGCTCCTCG ATCGACGAGG TCGAGATGAC GCTGATCGAG
GCGGTGGGGA TCGTCATCGT GGTGATCTTC CTGTTCCTCG CCTCGTTCCG GTCGGTGATC
ATCCCGGTAG TGACGATTCC GCTGTCGCTG ATCGGCGTCT GCACGGCGAT GCTGGCGATG
GGCTTCAGTA TCAATCTGCT CACGCTGCTG GCGATGGTGC TGGCGATCGG CCTCGTGGTC
GACGACGCCA TCGTCGTGGT CGAGAACATC CATCGACATC TCGAGGAGGG CAAGAGTCCC
GTCCAGGCCT CGCTGATCGG GGCCCGCGAG ATCGTCGGGC CGGTGATCTC GATGACCATC
ACGCTGGCCG CGGTGTACGC GCCGATCGGC TTCCTCGGCG GCCTCACCGG TGCGCTGTTC
CGCGAATTCG CCTTCACGCT CGCCGGCGCG GTGATCGTAT CCGGCATCAT CGCGCTGACG
CTGTCGCCGA TGATGTGCTC GGTGCTGTTG AAGCATCAGG AGAGCCAGGG CTGGTTCGCC
CGCAAGGTCG ACAGCGTGTT CGGCGCCACC ACGCGCTGGT ACGGGCGCCA GCTCGATCGC
TCGCTGGACT ATCGGCCGAT CACCGGGATG TTCGCGCTGG TGATCCTGGG CCTGGTCGGA
TTCATGTACA TGAATACGGC CAAGGAACTC GCGCCCGAGG AAGACCAGGG TATCGTCTTC
GCGGTCACCA AGGGGCCGAA ATACGCCAAT ATCGACTACT CCAACTACTA CGGAGAGAAG
CTCGACAAGG CGTTCGCGGG CTTCCCGGAG ACCGACCTGC GCTTCATCCT GAACGGCACG
TCGGGCCCGA ACAACGGCAT CGCGGGCATG TTGCTGAAGC CGTGGGACGA GCGCGAGCGG
TCGTCGATCA AGCTCAAGCC GCTGGTGCAG GCCGAACTCA GCAAGATCGA AGGCGTCAAC
GCCTTCGCCT TCAACCTGCC GCCGCTGCCC GGCGGTCCGG GCGGCCTGCC GATCCAGATG
GTGATCAACT CCACCACCGG CTTCCGCGCA GTTTACGAGG AGATGGTCAA GCTCAAGGAC
GCCGCGCGCA AGAGCGGGCT GTTCATCGTC GCCGACAGCG ATCTCGACTT CAACCAGCCG
GTGGTGCGGG TCAAGATCGA CCGCAACAAG GCCAACGATC TCGGCATCAC CATGTCGCAG
ATCGGCGGCA CGCTGGCGAC ACTGCTCGGC GGCAACTACA CCAACCGCTT CAATCTGGAA
GGCCGGTCGT ATCAGGTGAT CCCGCAGGTG CCGCGCGCGG ATCGGCTGTC GCCGAATTCG
CTCGACGGCT ATTATGTGCC GAGCGCCACC GGGCAGCAGG TGCCGCTGTC GACGCTGGTG
TCGATTGAAA CCGCGACCGA CCCGAACGCG CTGACGCACT TCAACCAGCT CAACTCCGCC
ACCTTCCAGG CGGTGCCGAT GCCGGGCGTC ACGGTGGGGC AGGCGGTGGA CTTCCTCGAG
CAGCAGGCGA AGAACCTGCC CTCCGGCTTC AACCACGATT ATCTGGCCGA CGCGCGGCAA
TACGTGAAGG AGGGCAATCA GCTCGCCATC ACCTTCGGCT TCGCGCTGAT CATCATCTTC
CTGGTGCTGG CCGCGCAGTT CGAAAGCCTG CGCGATCCGC TGGTGATCAT GATTTCGGTG
CCGATGGCGA TCTCGGGCGC GTTGATCCCG CTGTTCTTCG GCGTGGCGAC GATCAACATC
TACACCCAGG TCGGGTTGCT GACGCTGGTC GGCCTGATCA GCAAGCACGG CATCCTGATG
GTCGAGTTCG CCCGCGAGCT GCAGCTCAAG GAAGGGCTCG ACAAGCGCTC GGCGATGGAA
ATGGCGGCGC GGGTCCGGCT GCGGCCGATT CTGATGACCA CCGCCGCGAT GGTCACCGGC
CTGCTGCCGC TGCTGAGCGC GTCGGGCGCC GGCGCGGCGA GCCGGTTCTC GATCGGCCTC
GTGGTGGTGT CCGGCATGTT GATCGGCACG CTGTTCACGC TGTTCGTGCT GCCGGCCGTC
TACGTCGCGA TCGGCACCGA CCACCGCGCG GCGTCGGAGT CCGAGCGCGC CAAACAGATC
GAGGATTACG AGATGGAGCA GGCCTCGCCG TCGCTGAAGC CGACCTGA
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| Protein sequence | MGALTDIFIK RPVLSLVVSL LILLIGFRAA TTLPIRQYPK LSNTVITVTT VYPGASPDLM
QGFITTPLEQ AVASAEGIDY ITSSSTQGQS LITVYVKLNF DPNQALTEVL AKVNSVKYLI
PREANDPVIV KSTGETTAVM YIGFSSNELS GSAISDYLTR VVQPVLSTVE GVASADILGG
QTFAMRIWLD PIRMAGRGVS PDDVAAAIRA NNFQAAAGQT KGYLTVSNVS TNADLQNVDQ
FKQMTVKAKD GGFIRLQDVA TVELAAQSTD SSVAFSGERA IFIGVQATPQ GNPLNIVSGV
RALFPDIERN LPPSLKMKVA YDSTKFIRSS IDEVEMTLIE AVGIVIVVIF LFLASFRSVI
IPVVTIPLSL IGVCTAMLAM GFSINLLTLL AMVLAIGLVV DDAIVVVENI HRHLEEGKSP
VQASLIGARE IVGPVISMTI TLAAVYAPIG FLGGLTGALF REFAFTLAGA VIVSGIIALT
LSPMMCSVLL KHQESQGWFA RKVDSVFGAT TRWYGRQLDR SLDYRPITGM FALVILGLVG
FMYMNTAKEL APEEDQGIVF AVTKGPKYAN IDYSNYYGEK LDKAFAGFPE TDLRFILNGT
SGPNNGIAGM LLKPWDERER SSIKLKPLVQ AELSKIEGVN AFAFNLPPLP GGPGGLPIQM
VINSTTGFRA VYEEMVKLKD AARKSGLFIV ADSDLDFNQP VVRVKIDRNK ANDLGITMSQ
IGGTLATLLG GNYTNRFNLE GRSYQVIPQV PRADRLSPNS LDGYYVPSAT GQQVPLSTLV
SIETATDPNA LTHFNQLNSA TFQAVPMPGV TVGQAVDFLE QQAKNLPSGF NHDYLADARQ
YVKEGNQLAI TFGFALIIIF LVLAAQFESL RDPLVIMISV PMAISGALIP LFFGVATINI
YTQVGLLTLV GLISKHGILM VEFARELQLK EGLDKRSAME MAARVRLRPI LMTTAAMVTG
LLPLLSASGA GAASRFSIGL VVVSGMLIGT LFTLFVLPAV YVAIGTDHRA ASESERAKQI
EDYEMEQASP SLKPT
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